RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 TRPV6Q9H1D0 765 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 NFU1Q9UMS0 254 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 CCDC66A2RUB6 948 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 HAS3O00219 553 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 CLDN3O15551 220 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 B4GALT4O60513 344 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 LGR5O75473 907 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 MYBL1P10243 752 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 TBXAS1P24557 533 aaPredicted RBP12.39□□□□□ -0.43
PCAT1-202ENST00000561978 PIK3CAP42336 1068 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 ACOT2P49753 483 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 CDK7P50613 346 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 NLRP11P59045 1033 aaKnown RBP12.39□□□□□ -0.43
PCAT1-202ENST00000561978 PPFIA1Q13136 1202 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 BIRC3Q13489 604 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 SURF1Q15526 300 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 PTPROQ16827 1216 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 C1orf53Q5VUE5 145 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 TSHZ1Q6ZSZ6 1077 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 SLC43A3Q8NBI5 491 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 DDX1Q92499 740 aaKnown RBP12.39□□□□□ -0.43
PCAT1-202ENST00000561978 RNPC3Q96LT9 517 aaKnown RBP12.39□□□□□ -0.43
PCAT1-202ENST00000561978 KATNAL1Q9BW62 490 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 C2orf40Q9H1Z8 148 aa12.39□□□□□ -0.43
PCAT1-202ENST00000561978 UTP11Q9Y3A2 253 aaKnown RBP12.39□□□□□ -0.43
PCAT1-202ENST00000561978 AGPSO00116 658 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 HLA-DRAP01903 254 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 SYN1P17600 705 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 ZNF200P98182 395 aaPredicted RBP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 CAPSQ13938 189 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 HIC1Q14526 733 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 CLEC16AQ2KHT3 1053 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 CRELD2Q6UXH1 353 aaPredicted RBP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 TMEM92Q6UXU6 159 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 TRIM72Q6ZMU5 477 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 ZBTB8OSQ8IWT0 167 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 FAM126BQ8IXS8 530 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 ZNF564Q8TBZ8 553 aaPredicted RBP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 PRPF31Q8WWY3 499 aaKnown RBP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 ZNF653Q96CK0 615 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 CGRRF1Q99675 332 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 NUP85Q9BW27 656 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 TARS2Q9BW92 718 aaKnown RBP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 PLVAPQ9BX97 442 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 MRPL4Q9BYD3 311 aaKnown RBP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 RAB17Q9H0T7 212 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 SMARCAD1Q9H4L7 1026 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 PRDM5Q9NQX1 630 aaPredicted RBP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 FAM114A2Q9NRY5 505 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 ERAP1Q9NZ08 941 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 BHMG1C9JSJ3 638 aaPredicted RBP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 PHACTR2O75167 634 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 TOM1L1O75674 476 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 PTENP60484 403 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 FAAP100Q0VG06 881 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 MESDQ14696 234 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 CFAP58Q5T655 872 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 SEL1L2Q5TEA6 688 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 TDRD10Q5VZ19 366 aaKnown RBP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 GDF6Q6KF10 455 aaPredicted RBP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 ANKRD33Q7Z3H0 272 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 ATP8B4Q8TF62 1192 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 LRRC45Q96CN5 670 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 SH3GL2Q99962 352 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 ZSWIM1Q9BR11 485 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 FAM204AQ9H8W3 233 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 SETD4Q9NVD3 440 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCAT1-202ENST00000561978 ANKFY1Q9P2R3 1169 aa12.38□□□□□ -0.43
PCAT1-202ENST00000561978 SIP14410 1827 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 ESYT3A0FGR9 886 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 FAM187AA6NFU0 413 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 SNPHO15079 494 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 SMIM10L2AP0DMW4 78 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 SMIM10L2BP0DMW5 78 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 COMTP21964 271 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 CTNNA2P26232 953 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 LMAN1P49257 510 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 GYS2P54840 703 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 DHX34Q14147 1143 aaKnown RBP12.37□□□□□ -0.43
PCAT1-202ENST00000561978 HLTFQ14527 1009 aaKnown RBP eCLIP12.37□□□□□ -0.43
PCAT1-202ENST00000561978 MAPK6Q16659 721 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 ZBTB10Q96DT7 871 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 ZBTB45Q96K62 511 aaPredicted RBP12.37□□□□□ -0.43
PCAT1-202ENST00000561978 RUNDC3BQ96NL0 473 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 PI4K2AQ9BTU6 479 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 IMPG2Q9BZV3 1241 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 DDX47Q9H0S4 455 aaKnown RBP12.37□□□□□ -0.43
PCAT1-202ENST00000561978 AVENQ9NQS1 362 aaPredicted RBP12.37□□□□□ -0.43
PCAT1-202ENST00000561978 GTF2IRD1Q9UHL9 959 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 ZMYND8Q9ULU4 1186 aaPredicted RBP12.37□□□□□ -0.43
PCAT1-202ENST00000561978 MROH7Q68CQ1 1323 aa12.37□□□□□ -0.43
PCAT1-202ENST00000561978 EVPLQ92817 2033 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 A6NNZ2 444 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 DCDC2CA8MYV0 355 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 ASAP2O43150 1006 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 SPOPO43791 374 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CLTBP09497 229 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CYP2C9P11712 490 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms