RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 COASYQ13057 564 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 SYCP2LQ5T4T6 812 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 CCDC137Q6PK04 289 aaKnown RBP19.64■□□□□ 0.74
RAB40C-206ENST00000561781 PALB2Q86YC2 1186 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 PRPF31Q8WWY3 499 aaKnown RBP19.64■□□□□ 0.74
RAB40C-206ENST00000561781 ZFRQ96KR1 1074 aaKnown RBP19.64■□□□□ 0.74
RAB40C-206ENST00000561781 GPAMQ9HCL2 828 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 TAS2R1Q9NYW7 299 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 ZNHIT2Q9UHR6 403 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 STX8Q9UNK0 236 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 IGSF9BQ9UPX0 1349 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 FAM170AA1A519 330 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 CFAP69A5D8W1 941 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 FZD9O00144 591 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 TTC4O95801 387 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 CLPTM1O96005 669 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 ALAS1P13196 640 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 NFKBIAP25963 317 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 SLC18A1P54219 525 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 SAPCD2Q86UD0 394 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 SH3RF3Q8TEJ3 882 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-206ENST00000561781 RAD54LQ92698 747 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 RBM38Q9H0Z9 239 aaKnown RBP19.64■□□□□ 0.73
RAB40C-206ENST00000561781 PTPN22Q9Y2R2 807 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 TSC22D4Q9Y3Q8 395 aa19.64■□□□□ 0.73
RAB40C-206ENST00000561781 TRMUO75648 421 aaKnown RBP19.63■□□□□ 0.73
RAB40C-206ENST00000561781 CIB2O75838 187 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 BAG2O95816 211 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 CCDC62Q6P9F0 684 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 PACS1Q6VY07 963 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 PODNQ7Z5L7 613 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 LRRC6Q86X45 466 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 FAM186BQ8IYM0 893 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 EURLQ9NYK6 297 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 TBK1Q9UHD2 729 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 AJAP1Q9UKB5 411 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-206ENST00000561781 NAALADL1Q9UQQ1 740 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 PCDHAC2Q9Y5I4 1007 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 SYNGAP1Q96PV0 1343 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 BUD23O43709 281 aaKnown RBP19.63■□□□□ 0.73
RAB40C-206ENST00000561781 STK10O94804 968 aaKnown RBP19.63■□□□□ 0.73
RAB40C-206ENST00000561781 VCLP18206 1134 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 ABCB4P21439 1286 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 CA8P35219 290 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 TMED10P49755 219 aaKnown RBP19.63■□□□□ 0.73
RAB40C-206ENST00000561781 PDK3Q15120 406 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 MFSD14BQ5SR56 506 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 KCNK18Q7Z418 384 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 ZDHHC14Q8IZN3 488 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 RFFLQ8WZ73 363 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 SPOCK2Q92563 424 aa19.63■□□□□ 0.73
RAB40C-206ENST00000561781 RIOK1Q9BRS2 568 aaKnown RBP19.63■□□□□ 0.73
RAB40C-206ENST00000561781 RASA4BC9J798 803 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 RASA4O43374 803 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 FKBP6O75344 327 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 SMIM18P0DKX4 95 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 ESRRAP11474 423 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-206ENST00000561781 PCP11498 1178 aaKnown RBP19.62■□□□□ 0.73
RAB40C-206ENST00000561781 PON1P27169 355 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 CETN2P41208 172 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 DYNLL1P63167 89 aaKnown RBP19.62■□□□□ 0.73
RAB40C-206ENST00000561781 NR1H3Q13133 447 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 KRT72Q14CN4 511 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 NEPROQ6NW34 567 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 FAM161BQ96MY7 647 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 SRPK1Q96SB4 655 aaKnown RBP19.62■□□□□ 0.73
RAB40C-206ENST00000561781 TTC1Q99614 292 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 CCDC77Q9BR77 488 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 BARHL2Q9NY43 387 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 PLK2Q9NYY3 685 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 NDUFB5O43674 189 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 TFAP2AP05549 437 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 CLCN2P51788 898 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 ANKRD20A4Q4UJ75 823 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 FAM26FQ5R3K3 315 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 DACT2Q5SW24 774 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 TMCO4Q5TGY1 634 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 BORAQ6PGQ7 559 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 LNX1Q8TBB1 728 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-206ENST00000561781 ATP6V0A1Q93050 837 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 PLGRKTQ9HBL7 147 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 AAASQ9NRG9 546 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 HDAC9Q9UKV0 1011 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 SYNPO2Q9UMS6 1093 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.62■□□□□ 0.73
RAB40C-206ENST00000561781 NCANO14594 1321 aa19.62■□□□□ 0.73
RAB40C-206ENST00000561781 USP17L12C9JPN9 530 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 USP17L21D6R901 530 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 GGPS1O95749 300 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 RARBP10826 455 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 CTNNA2P26232 953 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 SCNN1DP51172 638 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 ARPC4P59998 168 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 NONOQ15233 471 aaKnown RBP eCLIP19.61■□□□□ 0.73
RAB40C-206ENST00000561781 MMEL1Q495T6 779 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 UGT2A3Q6UWM9 527 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 OTOAQ7RTW8 1153 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 SYT2Q8N9I0 419 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-206ENST00000561781 ZFP28Q8NHY6 868 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 DENND1AQ8TEH3 1009 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms