RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SPATA6Q9NWH7 488 aaPredicted RBP27.42■■□□□ 1.98
NME3-202ENST00000561637 INSL5Q9Y5Q6 135 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 KANSL1LA0AUZ9 987 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 ARHGEF37A1IGU5 675 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 RHOP08100 348 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 ZSCAN22P10073 491 aaPredicted RBP27.41■■□□□ 1.98
NME3-202ENST00000561637 ATF2P15336 505 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 TMEM132DQ14C87 1099 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 L1TD1Q5T7N2 865 aaKnown RBP27.41■■□□□ 1.98
NME3-202ENST00000561637 C9orf57Q5W0N0 161 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 SCARA3Q6AZY7 606 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 POMGNT1Q8WZA1 660 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 TCEAL4Q96EI5 215 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 SAAL1Q96ER3 474 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 SHDQ96IW2 340 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 ZNF396Q96N95 335 aaPredicted RBP27.41■■□□□ 1.98
NME3-202ENST00000561637 CRISPLD1Q9H336 500 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 PANK4Q9NVE7 773 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 SEL1LQ9UBV2 794 aa27.41■■□□□ 1.98
NME3-202ENST00000561637 PRPF6O94906 941 aaKnown RBP27.4■■□□□ 1.98
NME3-202ENST00000561637 F13A1P00488 732 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 CEBPBP17676 345 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 ELF1P32519 619 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 ADCY1Q08828 1119 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 ZNF528Q3MIS6 628 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 DSTYKQ6XUX3 929 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 TCEAL8Q8IYN2 117 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 BEST2Q8NFU1 509 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 DHX58Q96C10 678 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 HVCN1Q96D96 273 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 PGLYRP2Q96PD5 576 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 TMEM209Q96SK2 561 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 NCDNQ9UBB6 729 aa27.4■■□□□ 1.98
NME3-202ENST00000561637 TSC2P49815 1807 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 PPP6R2O75170 966 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 CPB1P15086 417 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 CD72P21854 359 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 ATXN1P54253 815 aaKnown RBP27.39■■□□□ 1.98
NME3-202ENST00000561637 LILRA4P59901 499 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 YWHAHQ04917 246 aaPredicted RBP27.39■■□□□ 1.98
NME3-202ENST00000561637 MLF2Q15773 248 aaPredicted RBP27.39■■□□□ 1.98
NME3-202ENST00000561637 SLFN12LQ6IEE8 588 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 HS6ST3Q8IZP7 471 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 CHAMP1Q96JM3 812 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 ACCSQ96QU6 501 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 KXD1Q9BQD3 176 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 BCO2Q9BYV7 579 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 FBXO4Q9UKT5 387 aa27.39■■□□□ 1.98
NME3-202ENST00000561637 MRPS23Q9Y3D9 190 aaKnown RBP27.39■■□□□ 1.98
NME3-202ENST00000561637 ZFP37Q9Y6Q3 630 aaPredicted RBP27.39■■□□□ 1.98
NME3-202ENST00000561637 ACACBO00763 2458 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 ANO9A1A5B4 782 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 GOLGA8IPA6NC78 632 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 GOLGA8JA6NMD2 632 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 TULP1O00294 542 aaPredicted RBP27.38■■□□□ 1.97
NME3-202ENST00000561637 PIRO00625 290 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 LAMTOR5O43504 91 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 OAZ2O95190 189 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 YEATS4O95619 227 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 LRG1P02750 347 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 CCR2P41597 374 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 CSTF1Q05048 431 aaKnown RBP27.38■■□□□ 1.97
NME3-202ENST00000561637 UBXN2BQ14CS0 331 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 SLC44A4Q53GD3 710 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 MCRS1Q96EZ8 462 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 SENP8Q96LD8 212 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 CORO1BQ9BR76 489 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 CBWD1Q9BRT8 395 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 FAM213AQ9BRX8 229 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 OLFML3Q9NRN5 406 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 CEP72Q9P209 647 aa27.38■■□□□ 1.97
NME3-202ENST00000561637 AFF4Q9UHB7 1163 aaKnown RBP27.38■■□□□ 1.97
NME3-202ENST00000561637 XPOTO43592 962 aaKnown RBP27.37■■□□□ 1.97
NME3-202ENST00000561637 HSP90AA1P07900 732 aaKnown RBP27.37■■□□□ 1.97
NME3-202ENST00000561637 CASP1P29466 404 aa27.37■■□□□ 1.97
NME3-202ENST00000561637 ABCD1P33897 745 aa27.37■■□□□ 1.97
NME3-202ENST00000561637 TPGS2Q68CL5 300 aa27.37■■□□□ 1.97
NME3-202ENST00000561637 CD302Q8IX05 232 aa27.37■■□□□ 1.97
NME3-202ENST00000561637 TTC9BQ8N6N2 239 aa27.37■■□□□ 1.97
NME3-202ENST00000561637 FAM170BA6NMN3 283 aa27.36■■□□□ 1.97
NME3-202ENST00000561637 CUTAO60888 179 aa27.36■■□□□ 1.97
NME3-202ENST00000561637 TWF1Q12792 350 aa27.36■■□□□ 1.97
NME3-202ENST00000561637 PRSS36Q5K4E3 855 aa27.36■■□□□ 1.97
NME3-202ENST00000561637 PCIF1Q9H4Z3 704 aa27.36■■□□□ 1.97
NME3-202ENST00000561637 ASB7Q9H672 318 aa27.36■■□□□ 1.97
NME3-202ENST00000561637 DPP3Q9NY33 737 aa27.36■■□□□ 1.97
NME3-202ENST00000561637 KCNH3Q9ULD8 1083 aa27.36■■□□□ 1.97
NME3-202ENST00000561637 DERAQ9Y315 318 aa27.36■■□□□ 1.97
NME3-202ENST00000561637 HOXD13P35453 343 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 PRKCQQ04759 706 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 OVOS1Q6IE37 1185 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 RTL10Q7L3V2 364 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 USP37Q86T82 979 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 ZBTB44Q8NCP5 570 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 OR10T2Q8NGX3 314 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 PLA2G2FQ9BZM2 168 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 TRIM9Q9C026 710 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 LTB4R2Q9NPC1 389 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 KBTBD4Q9NVX7 518 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 C2CD2Q9Y426 696 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms