RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 TNFRSF10AO00220 468 aa21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 ZMYND10O75800 440 aa21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 PRCPP42785 496 aa21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 C15orf39Q6ZRI6 1047 aa21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 TRAPPC11Q7Z392 1133 aa21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 CMASQ8NFW8 434 aaPredicted RBP21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 PLEKHO2Q8TD55 490 aa21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 SMG7Q92540 1137 aaKnown RBP21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 BORCS6Q96GS4 357 aa21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 GZF1Q9H116 711 aaPredicted RBP21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 MAN1B1Q9UKM7 699 aa21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 C2orf16Q68DN1 1984 aa21.46■■□□□ 1.03
TSPAN3-210ENST00000561277 OR4Q2P0C623 313 aa21.45■■□□□ 1.02
TSPAN3-210ENST00000561277 PPM1LQ5SGD2 360 aa21.45■■□□□ 1.02
TSPAN3-210ENST00000561277 ZNF461Q8TAF7 563 aa21.45■■□□□ 1.02
TSPAN3-210ENST00000561277 TMEM174Q8WUU8 243 aa21.45■■□□□ 1.02
TSPAN3-210ENST00000561277 PIDD1Q9HB75 910 aa21.45■■□□□ 1.02
TSPAN3-210ENST00000561277 DSEQ9UL01 958 aa21.45■■□□□ 1.02
TSPAN3-210ENST00000561277 LRRIQ3A6PVS8 624 aaPredicted RBP21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 BIN1O00499 593 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 CYP11A1P05108 521 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 MYBPC2Q14324 1141 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 ZCWPW2Q504Y3 356 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 WSCD1Q658N2 575 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 METTL23Q86XA0 190 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 ZNF707Q96C28 371 aaPredicted RBP21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 EEF2KMTQ96G04 330 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 PRKD2Q9BZL6 878 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 SNX9Q9Y5X1 595 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 NCOR1O75376 2440 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 BDP1A6H8Y1 2624 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 OR6C75A6NL08 312 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 PRRG1O14668 218 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 ELF1P32519 619 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 MYO1EQ12965 1108 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 CAMK4Q16566 473 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 RNF19BQ6ZMZ0 732 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 PARD3BQ8TEW8 1205 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 ZNF516Q92618 1163 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 HPDLQ96IR7 371 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 PGLYRP2Q96PD5 576 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 CYP4F11Q9HBI6 524 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 POLIQ9UNA4 740 aa21.44■■□□□ 1.02
TSPAN3-210ENST00000561277 C19orf67A6NJJ6 358 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 CCL16O15467 120 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 AKAP3O75969 853 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 ABLIM3O94929 683 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 ATF2P15336 505 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 RPL13P26373 211 aaKnown RBP21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 DLG4P78352 724 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 ADCY1Q08828 1119 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 ADAM9Q13443 819 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 NFIL3Q16649 462 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 CLEC17AQ6ZS10 378 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 CCDC149Q6ZUS6 474 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 OR10T2Q8NGX3 314 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 TMEM209Q96SK2 561 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 OXCT2Q9BYC2 517 aaPredicted RBP21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 L1RE1Q9UN81 338 aa21.43■■□□□ 1.02
TSPAN3-210ENST00000561277 LOC730098B7Z3J9 87 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 HUS1O60921 280 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 PHACTR2O75167 634 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 CLSTN1O94985 981 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 CST3P01034 146 aaPredicted RBP21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 HNRNPA1P09651 372 aaKnown RBP eCLIP21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 BIRC3Q13489 604 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 COBLL1Q53SF7 1204 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 TPGS2Q68CL5 300 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 FAM186BQ8IYM0 893 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 ADSSL1Q8N142 457 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 PDCL2Q8N4E4 241 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 GBP4Q96PP9 640 aa21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 GTPBP4Q9BZE4 634 aaKnown RBP21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 AFF4Q9UHB7 1163 aaKnown RBP21.42■■□□□ 1.02
TSPAN3-210ENST00000561277 DENND4AQ7Z401 1863 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 SEC24AO95486 1093 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 CDR1P51861 262 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 TRPC3Q13507 836 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 STIM1Q13586 685 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 EDRF1Q3B7T1 1238 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 TDRD10Q5VZ19 366 aaKnown RBP21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 CYP26C1Q6V0L0 522 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 THEM5Q8N1Q8 247 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 TSG101Q99816 390 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 RTP3Q9BQQ7 232 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 GDAP2Q9NXN4 497 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 NR2E1Q9Y466 385 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 CLUHO75153 1309 aa21.41■■□□□ 1.02
TSPAN3-210ENST00000561277 TRIM49BA6NDI0 452 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 XYLBO75191 536 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 BMP6P22004 513 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 HOXA9P31269 272 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 PSMC2P35998 433 aaKnown RBP21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 PMS1P54277 932 aaKnown RBP21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 UVSSAQ2YD98 709 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 CENPPQ6IPU0 288 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 KLHL10Q6JEL2 608 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 GRASPQ7Z6J2 395 aaPredicted RBP21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 KHSRPQ92945 711 aaKnown RBP eCLIP21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 C2CD4DB7Z1M9 353 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms