RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 L1RE1Q9UN81 338 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 BDP1A6H8Y1 2624 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 CALUO43852 315 aaPredicted RBP14.98□□□□□ -0.01
TPM1-230ENST00000561266 LRRN2O75325 713 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 ZMYND10O75800 440 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 VNN1O95497 513 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 C4BPAP04003 597 aaKnown RBP14.98□□□□□ -0.01
TPM1-230ENST00000561266 SRGAP2BP0DMP2 458 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 TNNI1P19237 187 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 NR2F2P24468 414 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 CLDN10P78369 228 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 CREMQ03060 361 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 YWHAHQ04917 246 aaPredicted RBP14.98□□□□□ -0.01
TPM1-230ENST00000561266 BFSP1Q12934 665 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 CCDC142Q17RM4 750 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 DUOXA2Q1HG44 320 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 TDRD10Q5VZ19 366 aaKnown RBP14.98□□□□□ -0.01
TPM1-230ENST00000561266 OVOS1Q6IE37 1185 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 PDXDC1Q6P996 788 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 LRRTM3Q86VH5 581 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 ADHFE1Q8IWW8 467 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 APPL2Q8NEU8 664 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 ANKRD36BP1Q96IX9 119 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 RMND1Q9NWS8 449 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 NME7Q9Y5B8 376 aa14.98□□□□□ -0.01
TPM1-230ENST00000561266 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.98□□□□□ -0.01
TPM1-230ENST00000561266 H7C4K7 107 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 NRG2O14511 850 aaPredicted RBP14.97□□□□□ -0.01
TPM1-230ENST00000561266 CCL16O15467 120 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 C1RP00736 705 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 TNNC2P02585 160 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 MYL6P60660 151 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 NTHL1P78549 312 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 RBP5P82980 135 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 ITIH3Q06033 890 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 ADAM9Q13443 819 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 MYBPC2Q14324 1141 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 SURF1Q15526 300 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 ZNF280DQ6N043 979 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 LIMS2Q7Z4I7 341 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 ZC3H3Q8IXZ2 948 aaKnown RBP14.97□□□□□ -0.01
TPM1-230ENST00000561266 PDCL2Q8N4E4 241 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 TTC9BQ8N6N2 239 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 LRRC52Q8N7C0 313 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 CMASQ8NFW8 434 aaPredicted RBP14.97□□□□□ -0.01
TPM1-230ENST00000561266 ZNF461Q8TAF7 563 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 SLC7A14Q8TBB6 771 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 GPT2Q8TD30 523 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 HDAC7Q8WUI4 952 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 CCDC34Q96HJ3 373 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 PGLYRP2Q96PD5 576 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 MED15Q96RN5 788 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 FNBP1Q96RU3 617 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 DUSP9Q99956 384 aaKnown RBP14.97□□□□□ -0.01
TPM1-230ENST00000561266 XYLT2Q9H1B5 865 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 PLEKHA4Q9H4M7 779 aa14.97□□□□□ -0.01
TPM1-230ENST00000561266 LOC730098B7Z3J9 87 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 N4BP1O75113 896 aaKnown RBP14.96□□□□□ -0.01
TPM1-230ENST00000561266 C8AP07357 584 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 TRIM49P0CI25 452 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 TRIM49CP0CI26 452 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 ODC1P11926 461 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 MCCD1P59942 119 aaPredicted RBP14.96□□□□□ -0.01
TPM1-230ENST00000561266 PPP3CAQ08209 521 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 SOWAHAQ2M3V2 549 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 SV2CQ496J9 727 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 POTEHQ6S545 545 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 C15orf39Q6ZRI6 1047 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 SMG7Q92540 1137 aaKnown RBP14.96□□□□□ -0.01
TPM1-230ENST00000561266 HPDLQ96IR7 371 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 RPGRIP1Q96KN7 1286 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 ZNF560Q96MR9 790 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 PHF7Q9BWX1 381 aaPredicted RBP14.96□□□□□ -0.01
TPM1-230ENST00000561266 PRKD2Q9BZL6 878 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 CLSTN2Q9H4D0 955 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 TMLHEQ9NVH6 421 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 HCFC1R1Q9NWW0 138 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 GDAP2Q9NXN4 497 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 KIAA1468Q9P260 1216 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 HOOK1Q9UJC3 728 aaKnown RBP14.96□□□□□ -0.01
TPM1-230ENST00000561266 POLIQ9UNA4 740 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 SNX9Q9Y5X1 595 aa14.96□□□□□ -0.01
TPM1-230ENST00000561266 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 C2CD4DB7Z1M9 353 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 KIF20AO95235 890 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 ATF2P15336 505 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 ACAT1P24752 427 aaKnown RBP14.95□□□□□ -0.02
TPM1-230ENST00000561266 CCNE1P24864 410 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 VAMP7P51809 220 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 ADCY1Q08828 1119 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 EDRF1Q3B7T1 1238 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 ATAT1Q5SQI0 421 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 KLHL10Q6JEL2 608 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 CES5AQ6NT32 575 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 USP37Q86T82 979 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 FAM186BQ8IYM0 893 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 GJD3Q8N144 294 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 ATAD1Q8NBU5 361 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 TMC2Q8TDI7 906 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 KBTBD7Q8WVZ9 684 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms