RNA–Protein interactions for RNA: ENST00000561255.5

CRTC3-213, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 520 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-213ENST00000561255 POLR3CQ9BUI4 534 aaPredicted RBP13.16□□□□□ -0.3
CRTC3-213ENST00000561255 KIFC3Q9BVG8 833 aa13.16□□□□□ -0.3
CRTC3-213ENST00000561255 DUSP15Q9H1R2 295 aaPredicted RBP13.16□□□□□ -0.3
CRTC3-213ENST00000561255 CDT1Q9H211 546 aa13.16□□□□□ -0.3
CRTC3-213ENST00000561255 PTPRHQ9HD43 1115 aa13.16□□□□□ -0.3
CRTC3-213ENST00000561255 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
CRTC3-213ENST00000561255 ASB3Q9Y575 518 aa13.16□□□□□ -0.3
CRTC3-213ENST00000561255 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
CRTC3-213ENST00000561255 ARHGEF35A5YM69 484 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 K7ERI5 159 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 MED24O75448 989 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 RHOBTB1O94844 696 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 OAZ2O95190 189 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 CEACAM1P13688 526 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 CSRP1P21291 193 aaKnown RBP13.15□□□□□ -0.3
CRTC3-213ENST00000561255 MCM4P33991 863 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 KRT2P35908 639 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 TNK2Q07912 1038 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 GRSF1Q12849 480 aaKnown RBP eCLIP13.15□□□□□ -0.3
CRTC3-213ENST00000561255 ELF2Q15723 593 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 TMEM196Q5HYL7 178 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 SH3PXD2AQ5TCZ1 1133 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 GAREM2Q75VX8 874 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 GPIHBP1Q8IV16 184 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 BPIFB1Q8TDL5 484 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 KIFAP3Q92845 792 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
CRTC3-213ENST00000561255 ACO2Q99798 780 aaKnown RBP13.15□□□□□ -0.3
CRTC3-213ENST00000561255 LARP6Q9BRS8 491 aaKnown RBP13.15□□□□□ -0.3
CRTC3-213ENST00000561255 CITO14578 2027 aa13.15□□□□□ -0.3
CRTC3-213ENST00000561255 BCLAF3A2AJT9 711 aaKnown RBP13.14□□□□□ -0.31
CRTC3-213ENST00000561255 M0QZQ0 153 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 TRDMT1O14717 391 aaKnown RBP13.14□□□□□ -0.31
CRTC3-213ENST00000561255 CAVIN2O95810 425 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 MCF2P10911 925 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 SPINK2P20155 84 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 MARCKSP29966 332 aaPredicted RBP13.14□□□□□ -0.31
CRTC3-213ENST00000561255 ALDH1A3P47895 512 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 OSTNP61366 133 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 YWHAHQ04917 246 aaPredicted RBP13.14□□□□□ -0.31
CRTC3-213ENST00000561255 SCRN1Q12765 414 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 DUSP4Q13115 394 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 GPR17Q13304 367 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 KARSQ15046 597 aaKnown RBP13.14□□□□□ -0.31
CRTC3-213ENST00000561255 ZNF568Q3ZCX4 644 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 ARHGAP15Q53QZ3 475 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 GPR158Q5T848 1215 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 FSTL4Q6MZW2 842 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 WASF1Q92558 559 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 ACAP3Q96P50 834 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 ATXN3LQ9H3M9 355 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
CRTC3-213ENST00000561255 THG1LQ9NWX6 298 aaKnown RBP13.14□□□□□ -0.31
CRTC3-213ENST00000561255 PHLPP2Q6ZVD8 1323 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 LNP1A1A4G5 178 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 OR6C75A6NL08 312 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 PRAMEF12O95522 483 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 RPA1P27694 616 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 GABRR2P28476 465 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 MCM2P49736 904 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 CREB5Q02930 508 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 RING1Q06587 406 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 CENPPQ6IPU0 288 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 DNAJB7Q7Z6W7 309 aaPredicted RBP13.13□□□□□ -0.31
CRTC3-213ENST00000561255 ITIH5Q86UX2 942 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 PGLYRP2Q96PD5 576 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 SCNM1Q9BWG6 230 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 MRPL4Q9BYD3 311 aaKnown RBP13.13□□□□□ -0.31
CRTC3-213ENST00000561255 TM6SF1Q9BZW5 370 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 TASP1Q9H6P5 420 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 EBF1Q9UH73 591 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 LHX6Q9UPM6 363 aa13.13□□□□□ -0.31
CRTC3-213ENST00000561255 FLNBO75369 2602 aaKnown RBP13.13□□□□□ -0.31
CRTC3-213ENST00000561255 WNT7AO00755 349 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 ABLIM1O14639 778 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 MEFVO15553 781 aaPredicted RBP13.12□□□□□ -0.31
CRTC3-213ENST00000561255 RNF40O75150 1001 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 REC8O95072 547 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 TOP3BO95985 862 aaKnown RBP13.12□□□□□ -0.31
CRTC3-213ENST00000561255 OR4Q2P0C623 313 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 MUTP22033 750 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 PROZP22891 400 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 IRX6P78412 446 aaPredicted RBP13.12□□□□□ -0.31
CRTC3-213ENST00000561255 MYBPC2Q14324 1141 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 ZCCHC14Q8WYQ9 949 aaKnown RBP13.12□□□□□ -0.31
CRTC3-213ENST00000561255 CHFRQ96EP1 664 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 FAM83CQ9BQN1 747 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 TMEM60Q9H2L4 133 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 TMEM9BQ9NQ34 198 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 GKN1Q9NS71 199 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 HSFX1Q9UBD0 423 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 ZMYM5Q9UJ78 669 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 NUP205Q92621 2012 aa13.12□□□□□ -0.31
CRTC3-213ENST00000561255 ASH1LQ9NR48 2969 aaKnown RBP13.11□□□□□ -0.31
CRTC3-213ENST00000561255 ATG2BQ96BY7 2078 aa13.11□□□□□ -0.31
CRTC3-213ENST00000561255 KHNYNO15037 678 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms