RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 KRT73Q86Y46 540 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 DCP2Q8IU60 420 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 CILP2Q8IUL8 1156 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 EPHX4Q8IUS5 362 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CPOQ8IVL8 374 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SLC44A2Q8IWA5 706 aaPredicted RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 THNSL1Q8IYQ7 743 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PLD6Q8N2A8 252 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 CARNMT1Q8N4J0 409 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TTC39CQ8N584 583 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 DTWD1Q8N5C7 304 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 C10orf53Q8N6V4 93 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 USP38Q8NB14 1042 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 KCTD6Q8NC69 237 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 LINC00116Q8NCU8 138 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SIMC1Q8NDZ2 872 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 APPL2Q8NEU8 664 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 GPR156Q8NFN8 814 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TTLL11Q8NHH1 800 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PPP1R14CQ8TAE6 165 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CYP2W1Q8TAV3 490 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 GDAP1Q8TB36 358 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CSGALNACT1Q8TDX6 532 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 ZFPM2Q8WW38 1151 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 ASB15Q8WXK1 588 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 POMGNT1Q8WZA1 660 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 HERVK_113Q902F9 699 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SMARCE1Q969G3 411 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 RAB24Q969Q5 203 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 RILPL2Q969X0 211 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SH3KBP1Q96B97 665 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SDCCAG3Q96C92 435 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 NSUN4Q96CB9 384 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 NMD3Q96D46 503 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 EID2BQ96D98 161 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 FAM120BQ96EK7 910 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 CYFIP2Q96F07 1278 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CFAP53Q96M91 514 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 RAB3IPQ96QF0 476 aaPredicted RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 RBM15Q96T37 977 aaKnown RBP eCLIP2.24□□□□□ -2.05
RTF1-207ENST00000561076 FOXB1Q99853 325 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CITED2Q99967 270 aaPredicted RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 HGH1Q9BTY7 390 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 APOL6Q9BWW8 343 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 EDEM3Q9BZQ6 932 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 MRPL18Q9H0U6 180 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 OR10A4Q9H209 315 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 KCNF1Q9H3M0 494 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 MTG2Q9H4K7 406 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 ERVMER34-1Q9H9K5 563 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 MLXIPQ9HAP2 919 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 RC3H2Q9HBD1 1191 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 MKNK2Q9HBH9 465 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CYP4F11Q9HBI6 524 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TMEM8AQ9HCN3 771 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 A1CFQ9NQ94 594 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 PLSCR4Q9NRQ2 329 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SEPT11Q9NVA2 429 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 KCNK4Q9NYG8 393 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TAS2R10Q9NYW0 307 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.24□□□□□ -2.05
RTF1-207ENST00000561076 NDUFAF4Q9P032 175 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PI4KBQ9UBF8 816 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 MYOTQ9UBF9 498 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 DBR1Q9UK59 544 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 RABL2BQ9UNT1 228 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CNPY2Q9Y2B0 182 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 DERAQ9Y315 318 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 RWDD3Q9Y3V2 267 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TRIM17Q9Y577 477 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PCDHB1Q9Y5F3 818 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 HS3ST4Q9Y661 456 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CYP46A1Q9Y6A2 500 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 ZFP37Q9Y6Q3 630 aaPredicted RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 GPRASP1Q5JY77 1395 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 RPTORQ8N122 1335 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 TCRBV5S4A2TA0A5A2 114 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SHISA3A0PJX4 238 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ARHGEF37A1IGU5 675 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 TRIM43BA6NCK2 446 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 MBD3L4A6NDZ8 208 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 MBD3L3A6NE82 208 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 CLCA1A8K7I4 914 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 C19orf81C9J6K1 198 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 H0Y3Z8 333 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 RAB27BO00194 218 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ARNTLO00327 626 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 NDC80O14777 642 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 KLK10O43240 276 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 DNPH1O43598 174 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 RGS10O43665 173 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PTP4A3O75365 173 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 GLP2RO95838 553 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PRLP01236 227 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 LRG1P02750 347 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 C4BPAP04003 597 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 ANXA1P04083 346 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PRKCBP05771 671 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PFKMP08237 780 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 QDPRP09417 244 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms