RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 A0A1B0GUL6 1792 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 FRYQ5TBA9 3013 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 SMCHD1A6NHR9 2005 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 LOC400499M0QZD8 3231 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 EYA2O00167 538 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 LAMTOR5O43504 91 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 CXCL10P02778 98 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 GRIA2P42262 883 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 KCNJ6P48051 423 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 RFX5P48382 616 aaPredicted RBP4.57□□□□□ -1.68
HERC1-211ENST00000560983 CLCN5P51795 746 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 COASYQ13057 564 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 RASGRF1Q13972 1273 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 CAMK1Q14012 370 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 FXNQ16595 210 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 LARP1BQ659C4 914 aaKnown RBP4.57□□□□□ -1.68
HERC1-211ENST00000560983 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.57□□□□□ -1.68
HERC1-211ENST00000560983 SMRP1Q8NCR6 262 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 REPS2Q8NFH8 660 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 TGFBRAP1Q8WUH2 860 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 RUBCNQ92622 972 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 RUNDC1Q96C34 613 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 LOXL4Q96JB6 756 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 RPGRIP1Q96KN7 1286 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 CTAGE1Q96RT6 745 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 TMEM209Q96SK2 561 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 PHF7Q9BWX1 381 aaPredicted RBP4.57□□□□□ -1.68
HERC1-211ENST00000560983 ABHD16BQ9H3Z7 469 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 SMOC1Q9H4F8 434 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 BICC1Q9H694 974 aaKnown RBP4.57□□□□□ -1.68
HERC1-211ENST00000560983 GPR27Q9NS67 375 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 GNL3LQ9NVN8 582 aaKnown RBP4.57□□□□□ -1.68
HERC1-211ENST00000560983 ASH2LQ9UBL3 628 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 RIPK3Q9Y572 518 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 INSL6Q9Y581 213 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 PCDHA2Q9Y5H9 948 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 FAM208BQ5VWN6 2430 aa4.57□□□□□ -1.68
HERC1-211ENST00000560983 CEP250Q9BV73 2442 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 ZNF236Q9UL36 1845 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 FLT1P17948 1338 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 ABHD14A-ACY1A0A1B0GW23 586 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 GRM6O15303 877 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 GPR42O15529 346 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 AKAP8O43823 692 aaKnown RBP4.56□□□□□ -1.68
HERC1-211ENST00000560983 NBNO60934 754 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 CYP7B1O75881 506 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 FLOT1O75955 427 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 GJB6O95452 261 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 LDHCP07864 332 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 ADORA1P30542 326 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 STAT3P40763 770 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 TNFAIP2Q03169 654 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 ANGPT1Q15389 498 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 SPTY2D1Q68D10 685 aaPredicted RBP4.56□□□□□ -1.68
HERC1-211ENST00000560983 RSPO2Q6UXX9 243 aaPredicted RBP4.56□□□□□ -1.68
HERC1-211ENST00000560983 LIMS2Q7Z4I7 341 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 MAPKAPK5Q8IW41 473 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 KLHL36Q8N4N3 616 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 MAGEB6Q8N7X4 407 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 SUMF1Q8NBK3 374 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 CYP2W1Q8TAV3 490 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 SUSD6Q92537 303 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 CLIC6Q96NY7 704 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 TANGO6Q9C0B7 1094 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 SMOC2Q9H3U7 446 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 SLC6A20Q9NP91 592 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 INCENPQ9NQS7 918 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 C9orf78Q9NZ63 289 aaPredicted RBP4.56□□□□□ -1.68
HERC1-211ENST00000560983 LRP2BPQ9P2M1 347 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 MYOTQ9UBF9 498 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 TSC22D4Q9Y3Q8 395 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 USP15Q9Y4E8 981 aaPredicted RBP4.56□□□□□ -1.68
HERC1-211ENST00000560983 R4GN57 208 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 SPTBN2O15020 2390 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 MYH3P11055 1940 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 BPTFQ12830 3046 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 MAST4O15021 2626 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 DOCK2Q92608 1830 aa4.56□□□□□ -1.68
HERC1-211ENST00000560983 ZFYVE26Q68DK2 2539 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 COL4A4P53420 1690 aaPredicted RBP4.55□□□□□ -1.68
HERC1-211ENST00000560983 PDS5AQ29RF7 1337 aaKnown RBP4.55□□□□□ -1.68
HERC1-211ENST00000560983 A0A1W2PQU0 124 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 VWA5AO00534 786 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 DLX3O60479 287 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 DGKIO75912 1065 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 DDAH1O94760 285 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 SSBP05455 408 aaKnown RBP eCLIP4.55□□□□□ -1.68
HERC1-211ENST00000560983 LINC00271P0C7V0 271 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 TGM1P22735 817 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 SHMT1P34896 483 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 MCAMP43121 646 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 TIMM10P62072 90 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 PPP2R2AP63151 447 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 ICAM4Q14773 271 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 SEPT2Q15019 361 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 ATP2B3Q16720 1220 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 ABCB5Q2M3G0 1257 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 TWISTNBQ3B726 338 aaPredicted RBP4.55□□□□□ -1.68
HERC1-211ENST00000560983 CERKLQ49MI3 558 aaPredicted RBP4.55□□□□□ -1.68
HERC1-211ENST00000560983 LRSAM1Q6UWE0 723 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms