RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SENP1Q9P0U3 644 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 ZNF212Q9UDV6 495 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 CREB3O43889 395 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 SSTR3P32745 418 aaPredicted RBP17.41■□□□□ 0.38
TPM1-228ENST00000560975 ARSEP51690 589 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 MFAP3P55082 362 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 TAS2R40P59535 323 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 KLF1Q13351 362 aaPredicted RBP17.41■□□□□ 0.38
TPM1-228ENST00000560975 SPDYAQ5MJ70 313 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 SLFN13Q68D06 897 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 RELL1Q8IUW5 271 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 FBXO27Q8NI29 283 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 HAUS1Q96CS2 278 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 CLPTM1LQ96KA5 538 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 TSSK1BQ9BXA7 367 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 SPATA16Q9BXB7 569 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 ASCC2Q9H1I8 757 aaPredicted RBP17.41■□□□□ 0.38
TPM1-228ENST00000560975 PSMC3IPQ9P2W1 217 aaPredicted RBP17.41■□□□□ 0.38
TPM1-228ENST00000560975 LMNB2Q03252 620 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 CFAP157Q5JU67 520 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 OTOP1Q7RTM1 612 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 TDRPQ86YL5 185 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 FAM84AQ96KN4 292 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 TTC25Q96NG3 672 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 DNPEPQ9ULA0 475 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 STK24Q9Y6E0 443 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 SPATA31D3P0C874 917 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 SPATA31D4Q6ZUB0 917 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 SHC3Q92529 594 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 OPTNQ96CV9 577 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 SH2D3AQ9BRG2 576 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 WDR18Q9BV38 432 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 AMNQ9BXJ7 453 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 SEL1LQ9UBV2 794 aa17.4■□□□□ 0.38
TPM1-228ENST00000560975 ATRNL1Q5VV63 1379 aa17.39■□□□□ 0.38
TPM1-228ENST00000560975 B2RBV5 119 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 H3BRJ5 948 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 DNALI1O14645 258 aaPredicted RBP17.39■□□□□ 0.37
TPM1-228ENST00000560975 SSTR1P30872 391 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 SLC18A1P54219 525 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 GPSM2P81274 684 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 DDB1Q16531 1140 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 ATP13A4Q4VNC1 1196 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 SLC9A9Q8IVB4 645 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 SLC25A41Q8N5S1 370 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 CFAP61Q8NHU2 1237 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 VCX3BQ9H321 246 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 VCX3AQ9NNX9 186 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 HSPBP1Q9NZL4 362 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 ZBTB12Q9Y330 459 aaPredicted RBP17.39■□□□□ 0.37
TPM1-228ENST00000560975 SH3BP1Q9Y3L3 701 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 UBE4BO95155 1302 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 PLSCR1O15162 318 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 IFNB1P01574 187 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 CDK16Q00536 496 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 TFDP1Q14186 410 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 LRRC36Q1X8D7 754 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 ALYREFQ86V81 257 aaKnown RBP17.39■□□□□ 0.37
TPM1-228ENST00000560975 FBXO11Q86XK2 927 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 DAW1Q8N136 415 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 ZNF398Q8TD17 642 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 VTI1AQ96AJ9 217 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 FAM210AQ96ND0 272 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 FNBP1Q96RU3 617 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 TUFT1Q9NNX1 390 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 TOPORSQ9NS56 1045 aaPredicted RBP17.39■□□□□ 0.37
TPM1-228ENST00000560975 ANGPTL2Q9UKU9 493 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 UMODL1Q5DID0 1318 aa17.39■□□□□ 0.37
TPM1-228ENST00000560975 ARHGEF35A5YM69 484 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 DDX39AO00148 427 aaKnown RBP17.38■□□□□ 0.37
TPM1-228ENST00000560975 FCHO1O14526 889 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 GRIN3BO60391 1043 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 ENO1P06733 434 aaKnown RBP17.38■□□□□ 0.37
TPM1-228ENST00000560975 ADRB2P07550 413 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 ANPEPP15144 967 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 ATF7P17544 494 aaPredicted RBP17.38■□□□□ 0.37
TPM1-228ENST00000560975 GAD2Q05329 585 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 CLEC16AQ2KHT3 1053 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 ZNF526Q8TF50 670 aaPredicted RBP17.38■□□□□ 0.37
TPM1-228ENST00000560975 AZIN2Q96A70 460 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 TUBB6Q9BUF5 446 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 KCNK13Q9HB14 408 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 MYL2P10916 166 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 ARL4CP56559 192 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 DSG1Q02413 1049 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 LIN52Q52LA3 116 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 XXYLT1Q8NBI6 393 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 DDX1Q92499 740 aaKnown RBP17.38■□□□□ 0.37
TPM1-228ENST00000560975 TTC17Q96AE7 1141 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 SKA1Q96BD8 255 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 RARBP10826 455 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 CCNFP41002 786 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 SLC1A1P43005 524 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 GSTA3Q16772 222 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 SLF2Q8IX21 1173 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 MCOLN2Q8IZK6 566 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 ZNF276Q8N554 614 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 NR1H4Q96RI1 486 aaPredicted RBP17.38■□□□□ 0.37
TPM1-228ENST00000560975 ECSITQ9BQ95 431 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms