RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ZC3H10Q96K80 434 aaKnown RBP20.22■□□□□ 0.83
TPM1-226ENST00000560959 DRC1Q96MC2 740 aa20.22■□□□□ 0.83
TPM1-226ENST00000560959 LSM14BQ9BX40 385 aaKnown RBP20.22■□□□□ 0.83
TPM1-226ENST00000560959 KMT5AQ9NQR1 393 aa20.22■□□□□ 0.83
TPM1-226ENST00000560959 GTSE1Q9NYZ3 720 aa20.22■□□□□ 0.83
TPM1-226ENST00000560959 KIAA1024Q9UPX6 916 aa20.22■□□□□ 0.83
TPM1-226ENST00000560959 ATG13O75143 517 aa20.21■□□□□ 0.83
TPM1-226ENST00000560959 TOM1L1O75674 476 aa20.21■□□□□ 0.83
TPM1-226ENST00000560959 RPP40O75818 363 aaKnown RBP20.21■□□□□ 0.83
TPM1-226ENST00000560959 CYP3A5P20815 502 aa20.21■□□□□ 0.83
TPM1-226ENST00000560959 MYBPC2Q14324 1141 aa20.21■□□□□ 0.83
TPM1-226ENST00000560959 PON2Q15165 354 aa20.21■□□□□ 0.83
TPM1-226ENST00000560959 SF3A2Q15428 464 aaKnown RBP20.21■□□□□ 0.83
TPM1-226ENST00000560959 STPG1Q5TH74 334 aa20.21■□□□□ 0.83
TPM1-226ENST00000560959 CENPPQ6IPU0 288 aa20.21■□□□□ 0.83
TPM1-226ENST00000560959 GAREM2Q75VX8 874 aa20.21■□□□□ 0.83
TPM1-226ENST00000560959 DNAJB7Q7Z6W7 309 aaPredicted RBP20.21■□□□□ 0.83
TPM1-226ENST00000560959 DAW1Q8N136 415 aa20.21■□□□□ 0.83
TPM1-226ENST00000560959 RALGAPA1Q6GYQ0 2036 aa20.2■□□□□ 0.83
TPM1-226ENST00000560959 PAX3P23760 479 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 ZNF174Q15697 407 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 ZBTB6Q15916 424 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 ARHGAP15Q53QZ3 475 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 USP37Q86T82 979 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 ITIH5Q86UX2 942 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 BPIFB1Q8TDL5 484 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 TSPAN18Q96SJ8 248 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 TMEM209Q96SK2 561 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 TIPINQ9BVW5 301 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 CRISPLD1Q9H336 500 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 THG1LQ9NWX6 298 aaKnown RBP20.2■□□□□ 0.82
TPM1-226ENST00000560959 LRWD1Q9UFC0 647 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 ZMYM5Q9UJ78 669 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 DNM3Q9UQ16 869 aa20.2■□□□□ 0.82
TPM1-226ENST00000560959 HIP1RO75146 1068 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 PROS1P07225 676 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 TYMPP19971 482 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 KCNA4P22459 653 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 CACNB1Q02641 598 aaPredicted RBP20.19■□□□□ 0.82
TPM1-226ENST00000560959 ITPRIPL2Q3MIP1 535 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 STXBP5Q5T5C0 1151 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 ZPBP2Q6X784 338 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 CAMKK1Q8N5S9 505 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 PGLYRP2Q96PD5 576 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 FOXP1Q9H334 677 aaPredicted RBP20.19■□□□□ 0.82
TPM1-226ENST00000560959 ATXN3LQ9H3M9 355 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 TASP1Q9H6P5 420 aa20.19■□□□□ 0.82
TPM1-226ENST00000560959 DDX19AQ9NUU7 478 aaKnown RBP20.19■□□□□ 0.82
TPM1-226ENST00000560959 EXTL3O43909 919 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 JAK2O60674 1132 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 KCNK5O95279 499 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 TRAPPC10P48553 1259 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 MCL1Q07820 350 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 STRN3Q13033 797 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 NOLC1Q14978 699 aaKnown RBP eCLIP20.18■□□□□ 0.82
TPM1-226ENST00000560959 TMEM196Q5HYL7 178 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 GPR158Q5T848 1215 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 KBTBD6Q86V97 674 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 C4orf32Q8N8J7 132 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 SPIRE2Q8WWL2 714 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 ZFYVE19Q96K21 471 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 ZBTB45Q96K62 511 aaPredicted RBP20.18■□□□□ 0.82
TPM1-226ENST00000560959 VPS45Q9NRW7 570 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 RXFP3Q9NSD7 469 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 TUBGCP4Q9UGJ1 667 aa20.18■□□□□ 0.82
TPM1-226ENST00000560959 UBQLN1Q9UMX0 589 aaKnown RBP20.18■□□□□ 0.82
TPM1-226ENST00000560959 TIMM13Q9Y5L4 95 aaPredicted RBP20.18■□□□□ 0.82
TPM1-226ENST00000560959 CACNA1GO43497 2377 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 TTC26A0AVF1 554 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 MTMR11A4FU01 709 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 CLTAP09496 248 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 OR4Q2P0C623 313 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 GABRR2P28476 465 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 MAPK7Q13164 816 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 RINT1Q6NUQ1 792 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 C1orf186Q6ZWK4 172 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 IGSF22Q8N9C0 903 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 TTC8Q8TAM2 541 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 RAB34Q9BZG1 259 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 SLC8A2Q9UPR5 921 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 SLC27A5Q9Y2P5 690 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 GREB1Q4ZG55 1949 aa20.17■□□□□ 0.82
TPM1-226ENST00000560959 TRDMT1O14717 391 aaKnown RBP20.16■□□□□ 0.82
TPM1-226ENST00000560959 SLC16A4O15374 487 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 CLDN3O15551 220 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 XPOTO43592 962 aaKnown RBP20.16■□□□□ 0.82
TPM1-226ENST00000560959 LARGE1O95461 756 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 CCDC192P0DO97 292 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 CDC25CP30307 473 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 TUFMP49411 452 aaKnown RBP20.16■□□□□ 0.82
TPM1-226ENST00000560959 MCM2P49736 904 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 AMPD2Q01433 879 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 TNK2Q07912 1038 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 GRSF1Q12849 480 aaKnown RBP eCLIP20.16■□□□□ 0.82
TPM1-226ENST00000560959 KYAT1Q16773 422 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 TTC38Q5R3I4 469 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 OVOS1Q6IE37 1185 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 ARMCX5Q6P1M9 558 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 GPIHBP1Q8IV16 184 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 ATAD1Q8NBU5 361 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms