RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 ANKS3Q6ZW76 656 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 USP33Q8TEY7 942 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 TMEM143Q96AN5 459 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 C5orf58C9J3I9 102 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 POLBP06746 335 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 VCAM1P19320 739 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 TRIM28Q13263 835 aaKnown RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 TMEM132DQ14C87 1099 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 KIZQ2M2Z5 673 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 IFNEQ86WN2 208 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 SPATA2LQ8IUW3 424 aaPredicted RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 E2F7Q96AV8 911 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 KLF6Q99612 283 aaPredicted RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 PLA2G12BQ9BX93 195 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 CDY2AQ9Y6F7 541 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 CDY1Q9Y6F8 540 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 KLRC1P26715 233 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 VEPH1Q14D04 833 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 CDR2LQ86X02 465 aaPredicted RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 RAB42Q8N4Z0 105 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 C2orf69Q8N8R5 385 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 SPATA18Q8TC71 538 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 FAM118BQ9BPY3 351 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 CCDC78A2IDD5 438 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 COILP38432 576 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 KLHDC7AQ5VTJ3 777 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 NYAP1Q6ZVC0 841 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 USP49Q70CQ1 688 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 PPP1R2P1Q96PQ5 205 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 MKNK1Q9BUB5 465 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 TMEM8AQ9HCN3 771 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 TMEM161AQ9NX61 479 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 PIN4Q9Y237 131 aaKnown RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 HECW2Q9P2P5 1572 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 LOC102724159A0A0B4J2E5 919 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 SPDYE5A6NIY4 337 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 MYO1GB0I1T2 1018 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 NDUFS3O75489 264 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 ATXN3P54252 364 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 SLC29A2Q14542 456 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 PWP2Q15269 919 aaKnown RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 SPDYE7PQ495Y7 208 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 ELOA2Q8IYF1 753 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 POLRMTO00411 1230 aaKnown RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 P4HA2O15460 535 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 ATMINO43313 823 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 CORO7P57737 925 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 ZNF677Q86XU0 584 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 CALML6Q8TD86 181 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 ZNF556Q9HAH1 456 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 GID8Q9NWU2 228 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 MAP3K20Q9NYL2 800 aaKnown RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 GNL1P36915 607 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 GEMIN4P57678 1058 aaKnown RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 PPIL6Q8IXY8 311 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 SP8Q8IXZ3 490 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 ZFYVE19Q96K21 471 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 CCT7Q99832 543 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 AXIN2Q9Y2T1 843 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 UBTFL6P0CB48 400 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 TCN1P20061 433 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 HSD17B3P37058 310 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 SNRPFP62306 86 aaKnown RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 AASDHQ4L235 1098 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 ZC2HC1CQ53FD0 456 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 COL23A1Q86Y22 540 aaPredicted RBP13.23□□□□□ -0.29
SYNM-203ENST00000560674 SCFD2Q8WU76 684 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 SERPINB12Q96P63 405 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 ERGIC2Q96RQ1 377 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 SH2D3AQ9BRG2 576 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 FLT1P17948 1338 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 E9PCH4 1651 aa13.23□□□□□ -0.29
SYNM-203ENST00000560674 HLA-DRAP01903 254 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 VHLP40337 213 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 KCNJ1P48048 391 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 CYLC2Q14093 348 aaPredicted RBP13.22□□□□□ -0.29
SYNM-203ENST00000560674 PDK1Q15118 436 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 CHI3L2Q15782 390 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 TRIM60Q495X7 471 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 DEPDC1Q5TB30 811 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 C4orf22Q6V702 233 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 KDM7AQ6ZMT4 941 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 TTC30AQ86WT1 665 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 FAM162AQ96A26 154 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 CST8O60676 142 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 TXNP10599 105 aaKnown RBP13.22□□□□□ -0.29
SYNM-203ENST00000560674 SERPINB3P29508 390 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 SHCBP1Q8NEM2 672 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 ANTXR2P58335 489 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 SYTL3Q4VX76 610 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 INPP5DQ92835 1189 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 VPS33BQ9H267 617 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 SUPT3HB4E1H0 165 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 PPP1R3GB7ZBB8 358 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 EMC2Q15006 297 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 PKN3Q6P5Z2 889 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms