RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ITPRIPL2Q3MIP1 535 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 STXBP5Q5T5C0 1151 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 ITIH5Q86UX2 942 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 TMC8Q8IU68 726 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 BEST2Q8NFU1 509 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 TMEM209Q96SK2 561 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 BHMT2Q9H2M3 363 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 SMOC1Q9H4F8 434 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 TMEM134Q9H6X4 195 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 ZMIZ1Q9ULJ6 1067 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 CTDNEP1O95476 244 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 OR4Q2P0C623 313 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 GABRR2P28476 465 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 HOXC13P31276 330 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 FOSBP53539 338 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 ELF2Q15723 593 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 PLA2G2CQ5R387 149 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 MPZL3Q6UWV2 235 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 GCNAQ96QF7 691 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 TARS2Q9BW92 718 aaKnown RBP19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 LRRC3Q9BY71 257 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 PTPRHQ9HD43 1115 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 KMT5AQ9NQR1 393 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 ATG2BQ96BY7 2078 aa19.43■□□□□ 0.7
TSPAN3-208ENST00000560514 OR6C75A6NL08 312 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 C1QTNF9BB2RNN3 333 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 OAZ2O95190 189 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 OR52Z1P0C646 297 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 C1QTNF9P0C862 333 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 CCT6AP40227 531 aaKnown RBP19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 NPTX2P47972 431 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 AMPD2Q01433 879 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 TNK2Q07912 1038 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 FOXC1Q12948 553 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 DAB2IPQ5VWQ8 1189 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 DSTYKQ6XUX3 929 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 DNAJB7Q7Z6W7 309 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 CAMKK1Q8N5S9 505 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 EDEM2Q9BV94 578 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 DNAJC25Q9H1X3 360 aa19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 TIMM13Q9Y5L4 95 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-208ENST00000560514 RHOBTB1O94844 696 aa19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 FDPSP14324 419 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 MCM2P49736 904 aa19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 STRN3Q13033 797 aa19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 GPR17Q13304 367 aa19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 ANKRD1Q15327 319 aa19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 SAFBQ15424 915 aaKnown RBP eCLIP19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 TAF12Q16514 161 aa19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 PSMG2Q969U7 264 aa19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 ZC3H10Q96K80 434 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 LRRC3BQ96PB8 259 aa19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 SLC27A5Q9Y2P5 690 aa19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 RBM19Q9Y4C8 960 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.41■□□□□ 0.7
TSPAN3-208ENST00000560514 CEP295Q9C0D2 2601 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 M0QZQ0 153 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 MATR3P43243 847 aaKnown RBP eCLIP19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 CREB5Q02930 508 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 ZNF252P-AS1Q0IIN9 211 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 VEPH1Q14D04 833 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 ACAP1Q15027 740 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 ARMCX5Q6P1M9 558 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 GAREM2Q75VX8 874 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 EXOC4Q96A65 974 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 DRC1Q96MC2 740 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 TASP1Q9H6P5 420 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 ANKFY1Q9P2R3 1169 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 TUBGCP4Q9UGJ1 667 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 KIAA1024Q9UPX6 916 aa19.4■□□□□ 0.7
TSPAN3-208ENST00000560514 EML5Q05BV3 1969 aa19.39■□□□□ 0.7
TSPAN3-208ENST00000560514 CDC25CP30307 473 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 MYBPC2Q14324 1141 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 NOLC1Q14978 699 aaKnown RBP eCLIP19.39■□□□□ 0.694e-6■□□□□ 8.2
TSPAN3-208ENST00000560514 KARSQ15046 597 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 PLK5Q496M5 336 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 OVOS1Q6IE37 1185 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 CENPPQ6IPU0 288 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 TCEAL6Q6IPX3 200 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 PKN3Q6P5Z2 889 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 ATAD1Q8NBU5 361 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 TCEAL3Q969E4 200 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 MKNK1Q9BUB5 465 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 CRISPLD1Q9H336 500 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 GKN1Q9NS71 199 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 ARHGAP28Q9P2N2 729 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 FRYQ5TBA9 3013 aa19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 ZNF638Q14966 1978 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-208ENST00000560514 TMEM8BA6NDV4 472 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 C4orf47A7E2U8 309 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 XPOTO43592 962 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 VNN2O95498 520 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 PRAMEF12O95522 483 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 CAVIN2O95810 425 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 NEFLP07196 543 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 PROZP22891 400 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 WEE1P30291 646 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 ZNF174Q15697 407 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 SLC10A6Q3KNW5 377 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms