RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 KCNC3Q14003 757 aa16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 MRPL58Q14197 206 aaKnown RBP16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 STX1AQ16623 288 aa16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 CTXN3Q4LDR2 81 aa16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 WSCD1Q658N2 575 aa16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 ZNF280DQ6N043 979 aa16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 FRMD5Q7Z6J6 570 aa16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 SLC22A17Q8WUG5 538 aa16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 BACE2Q9Y5Z0 518 aa16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 MTCL1Q9Y4B5 1905 aaKnown RBP16.68■□□□□ 0.26
LYSMD2-204ENST00000560491 BRWD1Q9NSI6 2320 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 TBC1D4O60343 1298 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 CLSTN1O94985 981 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 HLA-DRAP01903 254 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 CYP11A1P05108 521 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 SPATA31D3P0C874 917 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 TYMPP19971 482 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 KCNA5P22460 613 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 OR1D2P34982 312 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 PIK3CAP42336 1068 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 MXI1P50539 228 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 ARPP19P56211 112 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 TFF2Q03403 129 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 TYRO3Q06418 890 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 NFKBIBQ15653 356 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 CLUL1Q15846 466 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 OVOS1Q6IE37 1185 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 SPATA31D4Q6ZUB0 917 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 PDCL2Q8N4E4 241 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 TAS1R2Q8TE23 839 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 HLA-CQ95604 372 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 XYLT2Q9H1B5 865 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 METTL14Q9HCE5 456 aaKnown RBP16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 TMEM8AQ9HCN3 771 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 ANO10Q9NW15 660 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 GDAP2Q9NXN4 497 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 CLEC1BQ9P126 229 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 FBXL5Q9UKA1 691 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 L1RE1Q9UN81 338 aa16.67■□□□□ 0.26
LYSMD2-204ENST00000560491 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 H3BQ06 376 aaPredicted RBP16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 H7C4K7 107 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 TGM5O43548 720 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 NCK2O43639 380 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 HUS1O60921 280 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 OAZ2O95190 189 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 FGFR1OPO95684 399 aaKnown RBP16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 GLUD1P00367 558 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 OR4Q2P0C623 313 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 ROR1Q01973 937 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 TPD52L1Q16890 204 aaPredicted RBP16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 ZNF699Q32M78 642 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 KRT39Q6A163 491 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 SPOPLQ6IQ16 392 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 PPFIBP1Q86W92 1011 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 OSTM1Q86WC4 334 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 IRF2BP1Q8IU81 584 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 CNOT6LQ96LI5 555 aaKnown RBP16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 RTP3Q9BQQ7 232 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 PI4K2AQ9BTU6 479 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 DNAJC25Q9H1X3 360 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 NXF1Q9UBU9 619 aaKnown RBP16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 POLIQ9UNA4 740 aa16.66■□□□□ 0.26
LYSMD2-204ENST00000560491 ARHGEF37A1IGU5 675 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 SYCE3A1L190 88 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 FSD2A1L4K1 749 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 STX10O60499 249 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 LRRN2O75325 713 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 SLC34A2O95436 690 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 STAU1O95793 577 aaKnown RBP16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 GNA14O95837 355 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 ATICP31939 592 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 GTF2H1P32780 548 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 MARSP56192 900 aaKnown RBP16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 RAB33AQ14088 237 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 SOWAHAQ2M3V2 549 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 WDR72Q3MJ13 1102 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 HSP90AA4PQ58FG1 418 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 CT47A1Q5JQC4 288 aaPredicted RBP16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 SLC8B1Q6J4K2 584 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 TMEM184AQ6ZMB5 413 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 METTL23Q86XA0 190 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 CREBRFQ8IUR6 639 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 TRIM59Q8IWR1 403 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 TOP6BLQ8N6T0 577 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 OR10T2Q8NGX3 314 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 CASP10Q92851 521 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 TMEM209Q96SK2 561 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 MMS19Q96T76 1030 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 APOL5Q9BWW9 433 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 MAN1C1Q9NR34 630 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 THEGQ9P2T0 379 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 DSEQ9UL01 958 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 COG5Q9UP83 839 aa16.65■□□□□ 0.26
LYSMD2-204ENST00000560491 WDR27A2RRH5 827 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms