RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CLDN23Q96B33 292 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 PLIN2Q99541 437 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 GPR88Q9GZN0 384 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 HAPLN2Q9GZV7 340 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 BRD9Q9H8M2 597 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 RPF1Q9H9Y2 349 aaKnown RBP14.72□□□□□ -0.05
SMAD3-214ENST00000560402 TRPV4Q9HBA0 871 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 TBX20Q9UMR3 447 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 PCDHGA2Q9Y5H1 932 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 EP300Q09472 2414 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-214ENST00000560402 NPHP3-ACAD11A0A0J9YXS1 232 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 GADD45BO75293 160 aaPredicted RBP14.71□□□□□ -0.05
SMAD3-214ENST00000560402 LRRN2O75325 713 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 TBCAO75347 108 aaKnown RBP14.71□□□□□ -0.05
SMAD3-214ENST00000560402 YEATS4O95619 227 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 KRT18P05783 430 aaKnown RBP14.71□□□□□ -0.05
SMAD3-214ENST00000560402 ODC1P11926 461 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 CCR2P41597 374 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 ID4P47928 161 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 STK38Q15208 465 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 ENOX2Q16206 610 aaKnown RBP14.71□□□□□ -0.05
SMAD3-214ENST00000560402 FAM78AQ5JUQ0 283 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 TANGO2Q6ICL3 276 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 DSTYKQ6XUX3 929 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 RNF19BQ6ZMZ0 732 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 CCDC73Q6ZRK6 1079 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 MAML2Q8IZL2 1156 aaPredicted RBP14.71□□□□□ -0.05
SMAD3-214ENST00000560402 MYCT1Q8N699 235 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 RASSF8Q8NHQ8 419 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 LARP4BQ92615 738 aaKnown RBP14.71□□□□□ -0.05
SMAD3-214ENST00000560402 SMARCD2Q92925 531 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 IRF7Q92985 503 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 TCEAL4Q96EI5 215 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 MSANTD3Q96H12 275 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 TRMT61BQ9BVS5 477 aaKnown RBP14.71□□□□□ -0.05
SMAD3-214ENST00000560402 PLA2G2FQ9BZM2 168 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 BLOC1S4Q9NUP1 217 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 TMEM63CQ9P1W3 806 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 CEP72Q9P209 647 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 TFIP11Q9UBB9 837 aaKnown RBP14.71□□□□□ -0.05
SMAD3-214ENST00000560402 HSFX1Q9UBD0 423 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 DERAQ9Y315 318 aa14.71□□□□□ -0.05
SMAD3-214ENST00000560402 A0A0B4J269 797 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 LACTBL1A8MY62 500 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 FGF19O95750 216 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 PSMC3P17980 439 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 PLCG1P19174 1290 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 TNFSF9P41273 254 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 GPR17Q13304 367 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 SPATA1Q5VX52 437 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 C1orf228Q6PIY5 440 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 RUBCNQ92622 972 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 RAD54LQ92698 747 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 MSTO1Q9BUK6 570 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 TSPY26PQ9H489 355 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 ST6GALNAC4Q9H4F1 302 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 PRMT8Q9NR22 394 aaPredicted RBP14.7□□□□□ -0.06
SMAD3-214ENST00000560402 HEBP1Q9NRV9 189 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 RCOR1Q9UKL0 485 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 ASB3Q9Y575 518 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 CACNA1AO00555 2505 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 WDR87Q6ZQQ6 2873 aa14.7□□□□□ -0.06
SMAD3-214ENST00000560402 KIF26AQ9ULI4 1882 aaPredicted RBP14.69□□□□□ -0.06
SMAD3-214ENST00000560402 DCHS1Q96JQ0 3298 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 F5P12259 2224 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 SYCE3A1L190 88 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 MOSPD3O75425 235 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 MYL4P12829 197 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 EPHB3P54753 998 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 GTF2BQ00403 316 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 POU5F1Q01860 360 aaKnown RBP14.69□□□□□ -0.06
SMAD3-214ENST00000560402 SPAG1Q07617 926 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 OVOS1Q6IE37 1185 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 FAM173BQ6P4H8 233 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 POTEHQ6S545 545 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 VITQ6UXI7 678 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 HS6ST3Q8IZP7 471 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 ZSCAN18Q8TBC5 510 aaPredicted RBP14.69□□□□□ -0.06
SMAD3-214ENST00000560402 HVCN1Q96D96 273 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 HINFPQ9BQA5 517 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 FAM126AQ9BYI3 521 aaPredicted RBP14.69□□□□□ -0.06
SMAD3-214ENST00000560402 NUP62CLQ9H1M0 184 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 ASB7Q9H672 318 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 CPSF3Q9UKF6 684 aaKnown RBP14.69□□□□□ -0.06
SMAD3-214ENST00000560402 DSEQ9UL01 958 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 MTF2Q9Y483 593 aaPredicted RBP14.69□□□□□ -0.06
SMAD3-214ENST00000560402 SCN1AP35498 2009 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 DMXL1Q9Y485 3027 aa14.69□□□□□ -0.06
SMAD3-214ENST00000560402 FRYLO94915 3013 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 MTMR11A4FU01 709 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 CYP11A1P05108 521 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 CD72P21854 359 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 ALDH1A3P47895 512 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 ME1P48163 572 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 MLLT6P55198 1093 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-214ENST00000560402 GRM2Q14416 872 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 MCM6Q14566 821 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 PPP2R5DQ14738 602 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 TMEM132DQ14C87 1099 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 KARSQ15046 597 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms