RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SYNGAP1Q96PV0 1343 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 MAGEA13PA6NCF6 341 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 DCDC2CA8MYV0 355 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 B2RBV5 119 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 TTI1O43156 1089 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 CREB3O43889 395 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 PRDM1O75626 825 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 DCTN3O75935 186 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 NOL4O94818 638 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 ALAS1P13196 640 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 RARGP13631 454 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 CHRNA3P32297 505 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 PCK1P35558 622 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 FLT3P36888 993 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 VHLP40337 213 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 CLCN2P51788 898 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 YARSP54577 528 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 FKBP3Q00688 224 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 OCRLQ01968 901 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 RPL6Q02878 288 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 PTPN11Q06124 597 aaPredicted RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 KLRC3Q07444 240 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 ADAM9Q13443 819 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 RASGRF1Q13972 1273 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 KIAA1755Q5JYT7 1200 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 PERM1Q5SV97 790 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM182BQ5T319 152 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 PPP1R21Q6ZMI0 780 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 LDHAL6AQ6ZMR3 332 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 RGS9BPQ6ZS82 235 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 INTS8Q75QN2 995 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 PEX26Q7Z412 305 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 VN1R5Q7Z5H4 357 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 NT5DC3Q86UY8 548 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 LCA5Q86VQ0 697 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 TRIM59Q8IWR1 403 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 RIBC1Q8N443 379 aaPredicted RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 ANKRD13CQ8N6S4 541 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 MAGEB6Q8N7X4 407 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 SPATA5Q8NB90 893 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 SMC1BQ8NDV3 1235 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 ZNF398Q8TD17 642 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 MORC4Q8TE76 937 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 PIGOQ8TEQ8 1089 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 DNAJC9Q8WXX5 260 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 SLC7A3Q8WY07 619 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 NCSTNQ92542 709 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 TBC1D5Q92609 795 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 GAL3ST3Q96A11 431 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 AZIN2Q96A70 460 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM136AQ96C01 138 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 MAGEB18Q96M61 343 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 NR1H4Q96RI1 486 aaPredicted RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 PRMT1Q99873 361 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 MMTAG2Q9BU76 263 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 TUBB6Q9BUF5 446 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 LSM14BQ9BX40 385 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 DDX47Q9H0S4 455 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 AZI2Q9H6S1 392 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 DCLRE1BQ9H816 532 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 ZWILCHQ9H900 591 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 ARMT1Q9H993 441 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 IRAK4Q9NWZ3 460 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 KLHL14Q9P2G3 628 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 CIDEBQ9UHD4 219 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 LNPEPQ9UIQ6 1025 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 AMFRQ9UKV5 643 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 SOX13Q9UN79 622 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 MSRB2Q9Y3D2 182 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 KIF13AQ9H1H9 1805 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 SHANK3Q9BYB0 1731 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 ADGRA3Q8IWK6 1321 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 RPTORQ8N122 1335 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ELOA3CA0A087WX78 387 aaPredicted RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 A0A087X0T9 212 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ELOA3DA6NLF2 546 aaPredicted RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 MIF4GDA9UHW6 222 aaKnown RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ERVV-2B6SEH9 535 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 M0R082 166 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 RASGRF2O14827 1237 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 MAGEB2O15479 319 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 RIPK2O43353 540 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 PHF2O75151 1096 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 TTLL1O95922 423 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 H2AFZP0C0S5 128 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM228BP0C875 321 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ESRRAP11474 423 aaPredicted RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 PHKA1P46020 1223 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 POLGP54098 1239 aaPredicted RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 SLC18A1P54219 525 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 RAD23BP54727 409 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 CTSWP56202 376 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 DR1Q01658 176 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 GSTM4Q03013 218 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 RNASELQ05823 741 aaKnown RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 STRN3Q13033 797 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 MAPK7Q13164 816 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 AUHQ13825 339 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms