RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SYCE3A1L190 88 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 GTPBP10A4D1E9 387 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 BECN2A8MW95 431 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 TACC1O75410 805 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 ASS1P00966 412 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 AFPP02771 609 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 HOXB8P17481 243 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 KLRC2P26717 231 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 PCSK1P29120 753 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 CA8P35219 290 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 PIK3CAP42336 1068 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 MTIF2P46199 727 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 BRCC3P46736 316 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 GCLMP48507 274 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 FMO5P49326 533 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 ZNF165P49910 485 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 YWHAEP62258 255 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 DLG4P78352 724 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 COL19A1Q14993 1142 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 MAPRE1Q15691 268 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 MAN2A1Q16706 1144 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 DUSP6Q16828 381 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 UVSSAQ2YD98 709 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 WDR72Q3MJ13 1102 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 VARS2Q5ST30 1063 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 TDRD10Q5VZ19 366 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 OVOS1Q6IE37 1185 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 PLEKHO2Q8TD55 490 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 HASPINQ8TF76 798 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 C2orf15Q8WU43 125 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 PABPC5Q96DU9 382 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 KLHL5Q96PQ7 755 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 CYP3A43Q9HB55 503 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 RAB20Q9NX57 234 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 SNX9Q9Y5X1 595 aa12.94□□□□□ -0.34
RABGGTA-215ENST00000560207 CHD7Q9P2D1 2997 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 CST3P01034 146 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 CDK11BP21127 795 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 TBXAS1P24557 533 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 TKTP29401 623 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 GUCY2FP51841 1108 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 TSPY1Q01534 308 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 PPP3CAQ08209 521 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 KCNH2Q12809 1159 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 RAB33AQ14088 237 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 NFE2Q16621 373 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 AAK1Q2M2I8 961 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 PUS10Q3MIT2 529 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 ANO6Q4KMQ2 910 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 CTXN3Q4LDR2 81 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 RTP2Q5QGT7 225 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 C1orf220Q5T0J3 134 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 LMBRD2Q68DH5 695 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 LIMS2Q7Z4I7 341 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 DCP1BQ8IZD4 617 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 ZNF461Q8TAF7 563 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 RABGGTAQ92696 567 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 JAKMIP2Q96AA8 810 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 EEF2KMTQ96G04 330 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 ACBD6Q9BR61 282 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 DNAJC25Q9H1X3 360 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 FAM50BQ9Y247 325 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 DAAM1Q9Y4D1 1078 aa12.93□□□□□ -0.34
RABGGTA-215ENST00000560207 HIDE1A8MVS5 230 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 KCNJ18B7U540 433 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 F8W810 466 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 RBAK-RBAKDNI3L0D1 243 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 C2CD2LO14523 706 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 TBC1D4O60343 1298 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 CLSTN1O94985 981 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 GLUD1P00367 558 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 HLA-DRAP01903 254 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 CNPP09543 421 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 TRIM49P0CI25 452 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 TRIM49CP0CI26 452 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 IRS1P35568 1242 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 NRIP1P48552 1158 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 PLXNA3P51805 1871 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 MYL6P60660 151 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 KCNJ12Q14500 433 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 TCP11X2Q5H9J9 407 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 TCEAL5Q5H9L2 206 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 CDKAL1Q5VV42 579 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 CCDC149Q6ZUS6 474 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 TAS1R1Q7RTX1 841 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 UNC93AQ86WB7 457 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 MAFAQ8NHW3 353 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 MED15Q96RN5 788 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 MMS19Q96T76 1030 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 TUBGCP2Q9BSJ2 902 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 FUCA2Q9BTY2 467 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 RHOBTB2Q9BYZ6 727 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 XYLT2Q9H1B5 865 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 CACNG4Q9UBN1 327 aa12.92□□□□□ -0.34
RABGGTA-215ENST00000560207 LRRC10BA6NIK2 292 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 GOLGA6L19H0YKK7 550 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 GABRDO14764 452 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 PPEF2O14830 753 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms