RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 TPM4P67936 248 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 SATB1Q01826 763 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 MORC3Q14149 939 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 PRSS36Q5K4E3 855 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 RNF214Q8ND24 703 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 PIGOQ8TEQ8 1089 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 RAD54LQ92698 747 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 IRF7Q92985 503 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 DDX27Q96GQ7 796 aaKnown RBP22.31■■□□□ 1.16
PSEN1-225ENST00000560005 CORO1BQ9BR76 489 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 FZD8Q9H461 694 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 MAN1B1Q9UKM7 699 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 DNM3Q9UQ16 869 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 PIAS3Q9Y6X2 628 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 COL4A2P08572 1712 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 CEP295Q9C0D2 2601 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 ARHGEF37A1IGU5 675 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 BECN2A8MW95 431 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 GOLGA6L19H0YKK7 550 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 TMEM189-UBE2V1I3L0A0 370 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 I3L4J1 428 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 BIN1O00499 593 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 GDI1P31150 447 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 CLCNKBP51801 687 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 KCNB1Q14721 858 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 CSRP2Q16527 193 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 GLRA4Q5JXX5 417 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 CDCA2Q69YH5 1023 aaPredicted RBP22.3■■□□□ 1.16
PSEN1-225ENST00000560005 CNNM4Q6P4Q7 775 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 ANKS3Q6ZW76 656 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 MAP4K3Q8IVH8 894 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 ZBTB8OSQ8IWT0 167 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 ERCC4Q92889 916 aaPredicted RBP22.3■■□□□ 1.16
PSEN1-225ENST00000560005 ZNF334Q9HCZ1 680 aaPredicted RBP22.3■■□□□ 1.16
PSEN1-225ENST00000560005 USP20Q9Y2K6 914 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 GDAQ9Y2T3 454 aa22.3■■□□□ 1.16
PSEN1-225ENST00000560005 TICRRQ7Z2Z1 1910 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 PRRG1O14668 218 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 HRO43593 1189 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 PRR29P0C7W0 189 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 ELF1P32519 619 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 CXCL12P48061 93 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 ROR1Q01973 937 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 DMWDQ09019 674 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 SRSF5Q13243 272 aaKnown RBP22.29■■□□□ 1.16
PSEN1-225ENST00000560005 PRPF4BQ13523 1007 aaKnown RBP22.29■■□□□ 1.16
PSEN1-225ENST00000560005 GAS6Q14393 721 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 FAM187BQ17R55 369 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 CD300LGQ6UXG3 332 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.29■■□□□ 1.16
PSEN1-225ENST00000560005 GRAMD1CQ8IYS0 662 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 ASB16Q96NS5 453 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 PLIN2Q99541 437 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 CBX8Q9HC52 389 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 BLOC1S4Q9NUP1 217 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 KIAA1024Q9UPX6 916 aa22.29■■□□□ 1.16
PSEN1-225ENST00000560005 RALGAPA1Q6GYQ0 2036 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.28■■□□□ 1.16
PSEN1-225ENST00000560005 PVALEFA0A1B0GWK0 134 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 CHURC1-FNTBB4DL54 471 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 RPN1P04843 607 aaKnown RBP22.28■■□□□ 1.16
PSEN1-225ENST00000560005 PPP1R2P41236 205 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 CCR2P41597 374 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 BRCC3P46736 316 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 FNTBP49356 437 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 VITQ6UXI7 678 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 CATSPER3Q86XQ3 398 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 C3orf58Q8NDZ4 430 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 ZNF461Q8TAF7 563 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 ADPGKQ9BRR6 497 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 RALYQ9UKM9 306 aaKnown RBP22.28■■□□□ 1.16
PSEN1-225ENST00000560005 FRYQ5TBA9 3013 aa22.28■■□□□ 1.16
PSEN1-225ENST00000560005 WDR27A2RRH5 827 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 ZNF197O14709 1029 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 TRAPPC3O43617 180 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 CHRNB1P11230 501 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 PSMC3P17980 439 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 ERCC5P28715 1186 aaPredicted RBP22.27■■□□□ 1.16
PSEN1-225ENST00000560005 CUL4BQ13620 913 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 UPP1Q16831 310 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 EEF1DP3Q658K8 133 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 SLC8B1Q6J4K2 584 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 PDZD4Q76G19 769 aaPredicted RBP22.27■■□□□ 1.16
PSEN1-225ENST00000560005 ZSWIM3Q96MP5 696 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 PPP1R10Q96QC0 940 aaKnown RBP22.27■■□□□ 1.16
PSEN1-225ENST00000560005 NACC1Q96RE7 527 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 TRIM9Q9C026 710 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 CYP4F11Q9HBI6 524 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 GOLGA2P5Q9HBQ8 144 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 TRPV5Q9NQA5 729 aa22.27■■□□□ 1.16
PSEN1-225ENST00000560005 BAHCC1Q9P281 2608 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 IKBKBO14920 756 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 MED24O75448 989 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 MICAL2O94851 1124 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 ABLIM3O94929 683 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 EDN1P05305 212 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 PRKCBP05771 671 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 CCNE1P24864 410 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 VIPR2P41587 438 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 ARPP19P56211 112 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms