RNA–Protein interactions for RNA: ENST00000559476.2

ZEB1-215, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 1,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-215ENST00000559476 COBLL1Q53SF7 1204 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 TDRD12Q587J7 1177 aaKnown RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 RALGPS1Q5JS13 557 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 RRP12Q5JTH9 1297 aaKnown RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 AKNAD1Q5T1N1 836 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 SFMBT2Q5VUG0 894 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 DENND2CQ68D51 928 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 TTC19Q6DKK2 380 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 INTS8Q75QN2 995 aaKnown RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 HS2ST1Q7LGA3 356 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 TRPM8Q7Z2W7 1104 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 RAB11FIP4Q86YS3 637 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 NLGN1Q8N2Q7 840 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 FANCBQ8NB91 859 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 CTNNBL1Q8WYA6 563 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 RPGRQ92834 1020 aaKnown RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 P2RX5Q93086 422 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 EDC3Q96F86 508 aaKnown RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 CALML4Q96GE6 196 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 TRAPPC9Q96Q05 1148 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 XPO6Q96QU8 1125 aaKnown RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 CHP1Q99653 195 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 CCDC77Q9BR77 488 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 TRIM4Q9C037 500 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 FAM192AQ9GZU8 254 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 ANKRD2Q9GZV1 360 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 MIS12Q9H081 205 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 RABEP2Q9H5N1 569 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 RIC8AQ9NPQ8 531 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 KCNQ5Q9NR82 932 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 PAPOLBQ9NRJ5 636 aaKnown RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 INTS9Q9NV88 658 aaKnown RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 RGL1Q9NZL6 768 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 SCOCQ9UIL1 159 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 MYH6P13533 1939 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 ZNF646O15015 1829 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-215ENST00000559476 SLX4Q8IY92 1834 aa6.32□□□□□ -1.4
ZEB1-215ENST00000559476 MYH1P12882 1939 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 ZNF233A6NK53 670 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 B4DLN1 442 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 PDLIM1O00151 329 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 POLRMTO00411 1230 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 NDC80O14777 642 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 FOXN1O15353 648 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 PPIP5K2O43314 1243 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 CREB3O43889 395 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 DDAH1O94760 285 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 RHOBTB3O94955 611 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 MOCS3O95396 460 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 KRT1P04264 644 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 NQO1P15559 274 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 GUCY2FP51841 1108 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 CCNG1P51959 295 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 RPS8P62241 208 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 MRPS25P82663 173 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 SLC7A5Q01650 507 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 TAGLNQ01995 201 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 LRRC63Q05C16 580 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 GRAPQ13588 217 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 BLMHQ13867 455 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 NR0B2Q15466 257 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 EZH2Q15910 746 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 BTNL9Q6UXG8 535 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 ZNF365Q70YC5 407 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 BZW1Q7L1Q6 419 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 COL23A1Q86Y22 540 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 C2CD5Q86YS7 1000 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 SPPL2CQ8IUH8 684 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 GSPT2Q8IYD1 628 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 ARHGAP24Q8N264 748 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 SMC1BQ8NDV3 1235 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 WDR66Q8TBY9 1149 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 GRAPLQ8TC17 118 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 ACTRT1Q8TDG2 376 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 IGDCC4Q8TDY8 1250 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 SMCR8Q8TEV9 937 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 GIPC2Q8TF65 315 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 CCT6BQ92526 530 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 RAPGEF5Q92565 580 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 OSBP2Q969R2 916 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 GFM2Q969S9 779 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 KLHL29Q96CT2 875 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 RRP36Q96EU6 259 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 PGM2Q96G03 612 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 RBM17Q96I25 401 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 CDK5RAP3Q96JB5 506 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 CNOT6LQ96LI5 555 aaKnown RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 CAMKK2Q96RR4 588 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 KRT12Q99456 494 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 ROPN1BQ9BZX4 212 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 ADAMTS10Q9H324 1103 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 MMRN2Q9H8L6 949 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 KIF9Q9HAQ2 790 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 ROPN1Q9HAT0 212 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-215ENST00000559476 LY9Q9HBG7 655 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 SH3GLB2Q9NR46 395 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 GMIPQ9P107 970 aa6.31□□□□□ -1.4
ZEB1-215ENST00000559476 KLHL14Q9P2G3 628 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms