RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ADAM12O43184 909 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 TGFB1I1O43294 461 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 GALR2O43603 387 aaPredicted RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 KINO60870 393 aaKnown RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 GPR37L1O60883 481 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 PHACTR2O75167 634 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 ABLIM3O94929 683 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 RHOBTB3O94955 611 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 ITGB3P05106 788 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 CYP11A1P05108 521 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 POU2F2P09086 479 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 TRIM21P19474 475 aaKnown RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 FSHRP23945 695 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 POLR2BP30876 1174 aaKnown RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 TIE1P35590 1138 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 ALDH1A3P47895 512 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 LHX1P48742 406 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 TUFMP49411 452 aaKnown RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 CYP2J2P51589 502 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 GUCY2FP51841 1108 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 EPHB3P54753 998 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 ROR1Q01973 937 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 DPYDQ12882 1025 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 STK4Q13043 487 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 GPR17Q13304 367 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 PLD1Q13393 1074 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 TRPC3Q13507 836 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 STIM1Q13586 685 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 MRPL58Q14197 206 aaKnown RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 MYBPC2Q14324 1141 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 KCNB1Q14721 858 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 VEPH1Q14D04 833 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 TAF12Q16514 161 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 PTPN21Q16825 1174 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 PABPC1LQ4VXU2 614 aaKnown RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 CEP135Q66GS9 1140 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 CD300LGQ6UXG3 332 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 GRASPQ7Z6J2 395 aaPredicted RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 CBWD2Q8IUF1 395 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 WDR49Q8IV35 697 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 C12orf56Q8IXR9 622 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 EFCAB13Q8IY85 973 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 TCEAL8Q8IYN2 117 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 UBALD2Q8IYN6 164 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 DCP1BQ8IZD4 617 aaKnown RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 ZDHHC14Q8IZN3 488 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 TMEM86AQ8N2M4 240 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 C1orf127Q8N9H9 656 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 LEMD2Q8NC56 503 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 KIAA0895Q8NCT3 520 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 GLIS3Q8NEA6 775 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 C2orf15Q8WU43 125 aaKnown RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 TMEM174Q8WUU8 243 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 EDAQ92838 391 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 NXPE3Q969Y0 559 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 CCDC127Q96BQ5 260 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 CHAMP1Q96JM3 812 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 ZNF512Q96ME7 567 aaPredicted RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 GSDMAQ96QA5 445 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 MMS19Q96T76 1030 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 MTMR12Q9C0I1 747 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 IKZF4Q9H2S9 585 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 EPHX3Q9H6B9 360 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 CD320Q9NPF0 282 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 CHMP5Q9NZZ3 219 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 IGSF9Q9P2J2 1179 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 HSFX1Q9UBD0 423 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 LIMD1Q9UGP4 676 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 AFF4Q9UHB7 1163 aaKnown RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 AGAP1Q9UPQ3 857 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 SORCS3Q9UPU3 1222 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 HCN4Q9Y3Q4 1203 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 TIMM13Q9Y5L4 95 aaPredicted RBP4.71□□□□□ -1.66
SNX1-205ENST00000559339 KIAA1671Q9BY89 1806 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 BDP1A6H8Y1 2624 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 PRR33A8MZF0 331 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 IKBKBO14920 756 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 SPTLC1O15269 473 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 KLRC4O43908 158 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 TBC1D4O60343 1298 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 PAPLNO95428 1278 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 FGF19O95750 216 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 NR3C1P04150 777 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 RHOP08100 348 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 LAMP2P13473 410 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 KRT13P13646 458 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 P4HA1P13674 534 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 PTPN2P17706 415 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 NR2F2P24468 414 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 IGFBP6P24592 240 aaPredicted RBP4.7□□□□□ -1.66
SNX1-205ENST00000559339 PCSK1P29120 753 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 ATICP31939 592 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 HOXD13P35453 343 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 PPP1R2P41236 205 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 TNNC1P63316 161 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 ZXDAP98168 799 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 MYL7Q01449 175 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 TSPY1Q01534 308 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 CYP24A1Q07973 514 aa4.7□□□□□ -1.66
SNX1-205ENST00000559339 SIGLEC14Q08ET2 396 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms