RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 CD58P19256 250 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 IRAK1P51617 712 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 PMS2P54278 862 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 IGBP1P78318 339 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 LACTBP83111 547 aaPredicted RBP11.98□□□□□ -0.49
CLPX-204ENST00000559152 IFFO1Q0D2I5 559 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 CCL15Q16663 113 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 ZNF667Q5HYK9 610 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 LRRC38Q5VT99 294 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 HOOK3Q86VS8 718 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 ZDHHC14Q8IZN3 488 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 XYLT2Q9H1B5 865 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 PABPC3Q9H361 631 aaKnown RBP11.98□□□□□ -0.49
CLPX-204ENST00000559152 IFT122Q9HBG6 1241 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 AKT3Q9Y243 479 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 ATP8A1Q9Y2Q0 1164 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 B4GALT5O43286 388 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 PAEPP09466 180 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 NUDT17P0C025 328 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 NR1D1P20393 614 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 FLT3P36888 993 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 ASPAP45381 313 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 CDC42EP1Q00587 391 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 CAV1Q03135 178 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 ZNF844Q08AG5 666 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 PIGHQ14442 188 aaPredicted RBP11.98□□□□□ -0.49
CLPX-204ENST00000559152 KCTD16Q68DU8 428 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 DNAJC24Q6P3W2 148 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 LRRC31Q6UY01 552 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 APBB1IPQ7Z5R6 666 aaPredicted RBP11.98□□□□□ -0.49
CLPX-204ENST00000559152 DPP9Q86TI2 863 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 ERICH1Q86X53 443 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 NT5DC4Q86YG4 428 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 CCDC50Q8IVM0 306 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 RCOR2Q8IZ40 523 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 TTC39CQ8N584 583 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 LINC01465Q8N7H1 131 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 RBM41Q96IZ5 413 aaKnown RBP11.98□□□□□ -0.49
CLPX-204ENST00000559152 MS4A4AQ96JQ5 239 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 LHX5Q9H2C1 402 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 SLC5A4Q9NY91 659 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 GRHL1Q9NZI5 618 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 WHRNQ9P202 907 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 TCRBV7S2A1N4TA0A589 114 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 TMEM191CA6NGB0 347 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 BTBD19C9JJ37 291 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 CFHP08603 1231 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 STAG3L1P0CL83 205 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 ITIH2P19823 946 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 RPL21P46778 160 aaKnown RBP11.97□□□□□ -0.49
CLPX-204ENST00000559152 CDR1P51861 262 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 OSTNP61366 133 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 LMNB2Q03252 620 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 EEF1DP3Q658K8 133 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 DENND2CQ68D51 928 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 DCUN1D2Q6PH85 259 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 ZDHHC24Q6UX98 284 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 CPNE8Q86YQ8 564 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 BBOF1Q8ND07 529 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 ATL2Q8NHH9 583 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 FBXO25Q8TCJ0 367 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 AFG1LQ8WV93 481 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 ART4Q93070 314 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 PARK7Q99497 189 aaKnown RBP11.97□□□□□ -0.49
CLPX-204ENST00000559152 VRTNQ9H8Y1 702 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 CYP3A43Q9HB55 503 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 SCN4AP35499 1836 aa11.97□□□□□ -0.49
CLPX-204ENST00000559152 A0A087WZ62 844 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 H3BRB1 525 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 EIF3HO15372 352 aaKnown RBP eCLIP11.96□□□□□ -0.49
CLPX-204ENST00000559152 GJB1P08034 283 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 KRT19P08727 400 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 WEE2P0C1S8 567 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 CXCL8P10145 99 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 COPS2P61201 443 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 GNGT1P63211 74 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 CCNG2Q16589 344 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 ODF2Q5BJF6 829 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 MTHFD1LQ6UB35 978 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 PHLDB2Q86SQ0 1253 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 ZNF410Q86VK4 478 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 FDXACB1Q9BRP7 624 aaPredicted RBP11.96□□□□□ -0.49
CLPX-204ENST00000559152 ADPGKQ9BRR6 497 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 C16orf70Q9BSU1 422 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 BCO2Q9BYV7 579 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 TRIM7Q9C029 511 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 ABHD16BQ9H3Z7 469 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 TUT1Q9H6E5 874 aaKnown RBP11.96□□□□□ -0.49
CLPX-204ENST00000559152 MINDY3Q9H8M7 445 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 WDR35Q9P2L0 1181 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 SRRM3A6NNA2 597 aaPredicted RBP11.96□□□□□ -0.49
CLPX-204ENST00000559152 GPR25O00155 361 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 RARGP13631 454 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
CLPX-204ENST00000559152 SSR1P43307 286 aaKnown RBP11.96□□□□□ -0.49
CLPX-204ENST00000559152 DUSP28Q4G0W2 176 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 C2CD6Q53TS8 623 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 TMEM63BQ5T3F8 832 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms