RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 USP41Q3LFD5 358 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 TMC7Q7Z402 723 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 RBM23Q86U06 439 aaKnown RBP11.72□□□□□ -0.53
TPM1-217ENST00000559108 LUZP1Q86V48 1076 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 GLYCTKQ8IVS8 523 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 MICALL1Q8N3F8 863 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 PDCL2Q8N4E4 241 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 KLHL5Q96PQ7 755 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 ARID3AQ99856 593 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 TTPALQ9BTX7 342 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 RXFP1Q9HBX9 757 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 METTL14Q9HCE5 456 aaKnown RBP11.72□□□□□ -0.53
TPM1-217ENST00000559108 GDAP2Q9NXN4 497 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 TAB2Q9NYJ8 693 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 MTRRQ9UBK8 725 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 HMGXB4Q9UGU5 601 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 AJAP1Q9UKB5 411 aaPredicted RBP11.72□□□□□ -0.53
TPM1-217ENST00000559108 COQ4Q9Y3A0 265 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 SNX9Q9Y5X1 595 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 IRAK3Q9Y616 596 aa11.72□□□□□ -0.53
TPM1-217ENST00000559108 CYB561D2O14569 222 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 LETM1O95202 739 aaPredicted RBP11.71□□□□□ -0.53
TPM1-217ENST00000559108 CYP11A1P05108 521 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 URODP06132 367 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 EPCAMP16422 314 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 PIK3CAP42336 1068 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 NRIP1P48552 1158 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 ZNF445P59923 1031 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 KCNMA1Q12791 1236 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 SMC1AQ14683 1233 aaKnown RBP11.71□□□□□ -0.53
TPM1-217ENST00000559108 COL19A1Q14993 1142 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 KRT31Q15323 416 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 PSMD5Q16401 504 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 DUSP6Q16828 381 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 SV2CQ496J9 727 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 TCP11X2Q5H9J9 407 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 KRT39Q6A163 491 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 DSTYKQ6XUX3 929 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 SCARA5Q6ZMJ2 495 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 LRRTM3Q86VH5 581 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 GAS2L3Q86XJ1 694 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 SLC22A17Q8WUG5 538 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 KAT5Q92993 513 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 TATDN2Q93075 761 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 ZNF560Q96MR9 790 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 PKMYT1Q99640 499 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 CRISPLD1Q9H336 500 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 NSUN3Q9H649 340 aaKnown RBP11.71□□□□□ -0.53
TPM1-217ENST00000559108 VRTNQ9H8Y1 702 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 TMLHEQ9NVH6 421 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 CDH22Q9UJ99 828 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 FBXL5Q9UKA1 691 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 DENND4AQ7Z401 1863 aa11.71□□□□□ -0.53
TPM1-217ENST00000559108 NOTCH4Q99466 2003 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 SPTBN5Q9NRC6 3674 aaKnown RBP11.7□□□□□ -0.54
TPM1-217ENST00000559108 SYN3O14994 580 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 PHACTR2O75167 634 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 ATP2C2O75185 946 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 TBX10O75333 385 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 OAZ2O95190 189 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 GNA14O95837 355 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 SPATA31D3P0C874 917 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 TYMPP19971 482 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 ACAT1P24752 427 aaKnown RBP11.7□□□□□ -0.54
TPM1-217ENST00000559108 LMO2P25791 158 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 GTF2H1P32780 548 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 LTBRP36941 435 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 KLK7P49862 253 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 AP3M2P53677 418 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 NOP14P78316 857 aaKnown RBP11.7□□□□□ -0.54
TPM1-217ENST00000559108 MYL7Q01449 175 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 LRMPQ12912 555 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 ORC1Q13415 861 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 ZNF699Q32M78 642 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 WDR72Q3MJ13 1102 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 GJB7Q6PEY0 223 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 LRSAM1Q6UWE0 723 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 SPATA31D4Q6ZUB0 917 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 CREBRFQ8IUR6 639 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 ARHGEF19Q8IW93 802 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 UBR7Q8N806 425 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 FBXL13Q8NEE6 735 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 MICAL1Q8TDZ2 1067 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 TWNKQ96RR1 684 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 GAS2L1Q99501 681 aaPredicted RBP11.7□□□□□ -0.54
TPM1-217ENST00000559108 TUBGCP2Q9BSJ2 902 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 CRACR2AQ9BSW2 395 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 SIX2Q9NPC8 291 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 NGRNQ9NPE2 291 aaKnown RBP11.7□□□□□ -0.54
TPM1-217ENST00000559108 LMCD1Q9NZU5 365 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 NXF1Q9UBU9 619 aaKnown RBP11.7□□□□□ -0.54
TPM1-217ENST00000559108 PUF60Q9UHX1 559 aaKnown RBP11.7□□□□□ -0.54
TPM1-217ENST00000559108 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.7□□□□□ -0.54
TPM1-217ENST00000559108 HCFC2Q9Y5Z7 792 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 CDY1Q9Y6F8 540 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 GREB1Q4ZG55 1949 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 PATJQ8NI35 1801 aa11.7□□□□□ -0.54
TPM1-217ENST00000559108 WDR27A2RRH5 827 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 GABRDO14764 452 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 AFPP02771 609 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms