RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 FECHP22830 423 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 RAP1GAPP47736 663 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 SLC11A1P49279 550 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 CDH8P55286 799 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 YWHAEP62258 255 aaKnown RBP19.35■□□□□ 0.69
CLPX-203ENST00000558958 BTG3Q14201 252 aaPredicted RBP19.35■□□□□ 0.69
CLPX-203ENST00000558958 MEA1Q16626 185 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 SOWAHAQ2M3V2 549 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 FMNL3Q8IVF7 1028 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 HERC6Q8IVU3 1022 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 SENP8Q96LD8 212 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 ZNHIT6Q9NWK9 470 aaKnown RBP19.35■□□□□ 0.69
CLPX-203ENST00000558958 PRG3Q9Y2Y8 225 aaPredicted RBP19.35■□□□□ 0.69
CLPX-203ENST00000558958 CYB561D2O14569 222 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 HUS1O60921 280 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 GFPT2O94808 682 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 ATP2A2P16615 1042 aaKnown RBP19.34■□□□□ 0.69
CLPX-203ENST00000558958 CD58P19256 250 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 USP8P40818 1118 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 ASIC2Q16515 512 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 TIGD5Q53EQ6 642 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 C9orf50Q5SZB4 431 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 DPH6Q7L8W6 267 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 IRF2BP2Q7Z5L9 587 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 GPIHBP1Q8IV16 184 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 TOP6BLQ8N6T0 577 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 APPL2Q8NEU8 664 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 HASPINQ8TF76 798 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 ZBED2Q9BTP6 218 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 COLEC11Q9BWP8 271 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 L1RE1Q9UN81 338 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 FAN1Q9Y2M0 1017 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 PCDHB4Q9Y5E5 795 aa19.34■□□□□ 0.69
CLPX-203ENST00000558958 TACC1O75410 805 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 FAM163BP0C2L3 166 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 KRT5P13647 590 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 FERP16591 822 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 BCAR1P56945 870 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 CDK17Q00537 523 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 ARID5AQ03989 594 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 INCA1Q0VD86 236 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 TMEM270Q6UE05 265 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 DSTYKQ6XUX3 929 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 TMEM139Q8IV31 216 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 TTC39CQ8N584 583 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 SUSD3Q96L08 255 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 RAD9AQ99638 391 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 MRPL45Q9BRJ2 306 aaKnown RBP19.33■□□□□ 0.68
CLPX-203ENST00000558958 INSL6Q9Y581 213 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 CEP290O15078 2479 aa19.33■□□□□ 0.68
CLPX-203ENST00000558958 M0QZQ0 153 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 CYP26A1O43174 497 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 CCDC172P0C7W6 258 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 CLCN1P35523 988 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 PRKCIP41743 596 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 BRCC3P46736 316 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 ALDH7A1P49419 539 aaKnown RBP19.32■□□□□ 0.68
CLPX-203ENST00000558958 ZNF132P52740 706 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 HGSNATQ68CP4 663 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 PDCL2Q8N4E4 241 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 KBTBD7Q8WVZ9 684 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 BAG1Q99933 345 aaPredicted RBP19.32■□□□□ 0.68
CLPX-203ENST00000558958 MARCH5Q9NX47 278 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 ADAM28Q9UKQ2 775 aa19.32■□□□□ 0.68
CLPX-203ENST00000558958 BARX2Q9UMQ3 279 aaPredicted RBP19.32■□□□□ 0.68
CLPX-203ENST00000558958 MRPL42Q9Y6G3 142 aaKnown RBP19.32■□□□□ 0.68
CLPX-203ENST00000558958 I3L4J1 428 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 CILPO75339 1184 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 TADA2AO75478 443 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 SERPING1P05155 500 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 SKILP12757 684 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 PBX3P40426 434 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 SHHQ15465 462 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 WSCD1Q658N2 575 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 ADGRF2Q8IZF7 708 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 RBBP8NLQ8NC74 664 aaPredicted RBP19.31■□□□□ 0.68
CLPX-203ENST00000558958 CCDC112Q8NEF3 446 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 WHAMMQ8TF30 809 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 RNPC3Q96LT9 517 aaKnown RBP19.31■□□□□ 0.68
CLPX-203ENST00000558958 GDF15Q99988 308 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 KCNF1Q9H3M0 494 aa19.31■□□□□ 0.68
CLPX-203ENST00000558958 NT5C1B-RDH14C9J2C7 533 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 H0YGN5 161 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 TRAPPC3O43617 180 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 ODC1P11926 461 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 LAG3P18627 525 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 WARSP23381 471 aaKnown RBP19.3■□□□□ 0.68
CLPX-203ENST00000558958 RGS19P49795 217 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 CCZ1BP86790 482 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 CCZ1P86791 482 aaPredicted RBP19.3■□□□□ 0.68
CLPX-203ENST00000558958 KLHL30Q0D2K2 578 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 SPOUT1Q5T280 376 aaKnown RBP19.3■□□□□ 0.68
CLPX-203ENST00000558958 KCNT2Q6UVM3 1135 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 CYP26C1Q6V0L0 522 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 TMEM86AQ8N2M4 240 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 SP7Q8TDD2 431 aaPredicted RBP19.3■□□□□ 0.68
CLPX-203ENST00000558958 ZNF830Q96NB3 372 aaPredicted RBP19.3■□□□□ 0.68
CLPX-203ENST00000558958 CHP1Q99653 195 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 ARHGAP20Q9P2F6 1191 aa19.3■□□□□ 0.68
CLPX-203ENST00000558958 HMGXB4Q9UGU5 601 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms