RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 NR3C1P04150 777 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 C8AP07357 584 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 TYMPP19971 482 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 CCR2P41597 374 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 SLC5A9Q2M3M2 681 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 SOWAHAQ2M3V2 549 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 TRAPPC11Q7Z392 1133 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 NT5DC4Q86YG4 428 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 ZC3H3Q8IXZ2 948 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 GUF1Q8N442 669 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 ZNF461Q8TAF7 563 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 NOC3LQ8WTT2 800 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 HDAC7Q8WUI4 952 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 KBTBD7Q8WVZ9 684 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 CCDC127Q96BQ5 260 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 LRRC3Q9BY71 257 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 PRKD2Q9BZL6 878 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 LMBRD1Q9NUN5 540 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 DNMT3BQ9UBC3 853 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 MUTYHQ9UIF7 546 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 ARHGEF37A1IGU5 675 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 KPNA7A9QM74 516 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 PPP1R3GB7ZBB8 358 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 CYB561D2O14569 222 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 CCL16O15467 120 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 PRPF40AO75400 957 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 SOAT2O75908 522 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 ATF2P15336 505 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 LMO2P25791 158 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 SNRPFP62306 86 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 CREMQ03060 361 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 NFIL3Q16649 462 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 CTXN3Q4LDR2 81 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 COBLL1Q53SF7 1204 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 TDRD10Q5VZ19 366 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 CENPPQ6IPU0 288 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 ADSSL1Q8N142 457 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 PDCL2Q8N4E4 241 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 CSGALNACT2Q8N6G5 542 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 SLC7A14Q8TBB6 771 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 PGLYRP2Q96PD5 576 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 CGRRF1Q99675 332 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 RPP25Q9BUL9 199 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 SDCBP2Q9H190 292 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 PLEKHA4Q9H4M7 779 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 WDR6Q9NNW5 1121 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 CEP72Q9P209 647 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 NCANO14594 1321 aa13.64□□□□□ -0.23
RABGGTA-207ENST00000558936 GABRDO14764 452 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 TRAPPC3O43617 180 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 ASGR2P07307 311 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 DLATP10515 647 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 MTHFRP42898 656 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 TAF6P49848 677 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 ARPP19P56211 112 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 YWHAHQ04917 246 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 PPP3CAQ08209 521 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 ZNF658Q5TYW1 1059 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 ANKRD40Q6AI12 368 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 CES5AQ6NT32 575 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 GRASPQ7Z6J2 395 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 WDR49Q8IV35 697 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 TCEAL8Q8IYN2 117 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 ATAD1Q8NBU5 361 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 ITFG1Q8TB96 612 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 DUSP9Q99956 384 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 ZCWPW1Q9H0M4 648 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 GDAP2Q9NXN4 497 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 SLC27A5Q9Y2P5 690 aa13.63□□□□□ -0.23
RABGGTA-207ENST00000558936 MTMR11A4FU01 709 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 EXOC3O60645 756 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 ATP2C2O75185 946 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 ACAT1P24752 427 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 MYL6P60660 151 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 ADCY1Q08828 1119 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 GPR17Q13304 367 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 MORC3Q14149 939 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 PRSS36Q5K4E3 855 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 ATAT1Q5SQI0 421 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 IER5LQ5T953 404 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 OVOS1Q6IE37 1185 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 PDXDC1Q6P996 788 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 DSTYKQ6XUX3 929 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 STXBP4Q6ZWJ1 553 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 HS6ST3Q8IZP7 471 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 RSAD2Q8WXG1 361 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 SMG7Q92540 1137 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 TCEAL4Q96EI5 215 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 RIPOR3Q96MK2 946 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 NECTIN4Q96NY8 510 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 GSDMAQ96QA5 445 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 MRPL45Q9BRJ2 306 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 TMEM30AQ9NV96 361 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 ZDHHC7Q9NXF8 308 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 ITGA11Q9UKX5 1188 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 POLIQ9UNA4 740 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms