RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CYP2J2P51589 502 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 HTR4Q13639 388 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 FAM26FQ5R3K3 315 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 WSCD1Q658N2 575 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 CBWD2Q8IUF1 395 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 BRSK2Q8IWQ3 736 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 NPAS3Q8IXF0 933 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 TCEAL8Q8IYN2 117 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 TMEM105Q8N8V8 129 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 OR10T2Q8NGX3 314 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 GPR152Q8TDT2 470 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 LEO1Q8WVC0 666 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-208ENST00000558827 SPATA32Q96LK8 384 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 PHOX2BQ99453 314 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 LRRC27Q9C0I9 530 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 TMEM206Q9H813 350 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 CEP72Q9P209 647 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 DUSP12Q9UNI6 340 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 DERAQ9Y315 318 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 WDFY4Q6ZS81 3184 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 ARHGEF37A1IGU5 675 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 KRBA1A5PL33 1030 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 IL18RAPO95256 599 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 PFKFB1P16118 471 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 CCR2P41597 374 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 TAF6P49848 677 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 GPC5P78333 572 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 BFSP1Q12934 665 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 ALCAMQ13740 583 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 SLC39A12Q504Y0 691 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 TPGS2Q68CL5 300 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 CEP57L1Q8IYX8 460 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 GPD1LQ8N335 351 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 CSGALNACT2Q8N6G5 542 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 C1orf127Q8N9H9 656 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 ZNF512Q96ME7 567 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-208ENST00000558827 RTP3Q9BQQ7 232 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 PLA2G2FQ9BZM2 168 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 CUEDC2Q9H467 287 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 C2CD2Q9Y426 696 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 YIPF1Q9Y548 306 aa13.52□□□□□ -0.25
SMAD3-208ENST00000558827 PTPRJQ12913 1337 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 MTMR11A4FU01 709 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 OR6C75A6NL08 312 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 ANHXE9PGG2 379 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 HCRTO43612 131 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 NPR3P17342 541 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 TYMPP19971 482 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 RFX1P22670 979 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 ACAT1P24752 427 aaKnown RBP13.51□□□□□ -0.25
SMAD3-208ENST00000558827 NHLH1Q02575 133 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 STXBP4Q6ZWJ1 553 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 UNC13DQ70J99 1090 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 EPM2AIP1Q7L775 607 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-208ENST00000558827 ALYREFQ86V81 257 aaKnown RBP13.51□□□□□ -0.25
SMAD3-208ENST00000558827 LRRTM3Q86VH5 581 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 METTL23Q86XA0 190 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 OR5B17Q8NGF7 314 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 ZNF507Q8TCN5 953 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 SCFD1Q8WVM8 642 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 BORCS6Q96GS4 357 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 PAGE5Q96GU1 130 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 ZSWIM3Q96MP5 696 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 TSPAN18Q96SJ8 248 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 MTMR12Q9C0I1 747 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 HSPBP1Q9NZL4 362 aa13.51□□□□□ -0.25
SMAD3-208ENST00000558827 KMT2EQ8IZD2 1858 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 COL4A3Q01955 1670 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 ZNF233A6NK53 670 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 KPNA7A9QM74 516 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 H0Y858 1186 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 TGFB1I1O43294 461 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 ACTN4O43707 911 aaKnown RBP13.5□□□□□ -0.25
SMAD3-208ENST00000558827 LDHAP00338 332 aaKnown RBP13.5□□□□□ -0.25
SMAD3-208ENST00000558827 TMEM191BP0C7N4 346 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 SRFP11831 508 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 PDIA4P13667 645 aaKnown RBP13.5□□□□□ -0.25
SMAD3-208ENST00000558827 KRT85P78386 507 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 TCF15Q12870 199 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 GPR17Q13304 367 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 CCDC142Q17RM4 750 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 SV2CQ496J9 727 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 CYP4A22Q5TCH4 519 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 CWF19L1Q69YN2 538 aaKnown RBP13.5□□□□□ -0.25
SMAD3-208ENST00000558827 ATL3Q6DD88 541 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 ASTLQ6HA08 431 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-208ENST00000558827 TANGO2Q6ICL3 276 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 IQCEQ6IPM2 695 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 CENPPQ6IPU0 288 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 PDZD4Q76G19 769 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-208ENST00000558827 ELMOD1Q8N336 334 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 STKLD1Q8NE28 680 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 FAM200AQ8TCP9 573 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 GIPC2Q8TF65 315 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 CACTINQ8WUQ7 758 aaKnown RBP13.5□□□□□ -0.25
SMAD3-208ENST00000558827 CCDC127Q96BQ5 260 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 SEPT5Q99719 369 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-208ENST00000558827 LPIN3Q9BQK8 851 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 SIX4Q9UIU6 781 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms