RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 HS2ST1Q7LGA3 356 aa16.52■□□□□ 0.24
RPL28-207ENST00000558815 SUGP1Q8IWZ8 645 aaKnown RBP16.52■□□□□ 0.24
RPL28-207ENST00000558815 TCEAL8Q8IYN2 117 aa16.52■□□□□ 0.24
RPL28-207ENST00000558815 UBALD2Q8IYN6 164 aa16.52■□□□□ 0.24
RPL28-207ENST00000558815 CSGALNACT2Q8N6G5 542 aa16.52■□□□□ 0.24
RPL28-207ENST00000558815 C1orf127Q8N9H9 656 aa16.52■□□□□ 0.24
RPL28-207ENST00000558815 ITFG1Q8TB96 612 aa16.52■□□□□ 0.24
RPL28-207ENST00000558815 MTMR12Q9C0I1 747 aa16.52■□□□□ 0.24
RPL28-207ENST00000558815 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.52■□□□□ 0.243e-6■■■■□ 25.1
RPL28-207ENST00000558815 AFF4Q9UHB7 1163 aaKnown RBP16.52■□□□□ 0.24
RPL28-207ENST00000558815 USP25Q9UHP3 1055 aa16.52■□□□□ 0.24
RPL28-207ENST00000558815 ARHGEF37A1IGU5 675 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 OR6C75A6NL08 312 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 TGFB1I1O43294 461 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 NARSO43776 548 aaKnown RBP16.51■□□□□ 0.23
RPL28-207ENST00000558815 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 LAMP2P13473 410 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 TWF1Q12792 350 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 SCARA3Q6AZY7 606 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 ASIC4Q96FT7 647 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 ANKRD36BP1Q96IX9 119 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 MFSD14AQ96MC6 490 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 CORO1BQ9BR76 489 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 GOLPH3LQ9H4A5 285 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 IGSF9Q9P2J2 1179 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 EPS15L1Q9UBC2 864 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 DSEQ9UL01 958 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 MRPS23Q9Y3D9 190 aaKnown RBP16.51■□□□□ 0.23
RPL28-207ENST00000558815 R3HCC1Q9Y3T6 440 aaKnown RBP16.51■□□□□ 0.23
RPL28-207ENST00000558815 NOTCH4Q99466 2003 aa16.51■□□□□ 0.23
RPL28-207ENST00000558815 PTPRJQ12913 1337 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 KPNA7A9QM74 516 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 PDGFBP01127 241 aaPredicted RBP16.5■□□□□ 0.23
RPL28-207ENST00000558815 TNNC2P02585 160 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 RHOP08100 348 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 PTPN2P17706 415 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 PAX3P23760 479 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 NUCB2P80303 420 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 STK4Q13043 487 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 SURF1Q15526 300 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 SNRNP35Q16560 246 aaKnown RBP16.5■□□□□ 0.23
RPL28-207ENST00000558815 WSCD1Q658N2 575 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 RTL10Q7L3V2 364 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 THEM5Q8N1Q8 247 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 ELMOD1Q8N336 334 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 KIAA0895Q8NCT3 520 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 OR5B17Q8NGF7 314 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 OR10T2Q8NGX3 314 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 FGF13Q92913 245 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 OXCT2Q9BYC2 517 aaPredicted RBP16.5■□□□□ 0.23
RPL28-207ENST00000558815 CDH7Q9ULB5 785 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 SLC27A5Q9Y2P5 690 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 YIPF1Q9Y548 306 aa16.5■□□□□ 0.23
RPL28-207ENST00000558815 A0A1W2PQ27 194 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 A0A1W2PQ64 194 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 A0A1W2PQD8 194 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 RPN1P04843 607 aaKnown RBP16.49■□□□□ 0.23
RPL28-207ENST00000558815 CYP11A1P05108 521 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 POU2F2P09086 479 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
RPL28-207ENST00000558815 PNPLA4P41247 253 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 DUSP4Q13115 394 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 GPR17Q13304 367 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 MYBPC2Q14324 1141 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 KNOP1Q1ED39 458 aaKnown RBP16.49■□□□□ 0.23
RPL28-207ENST00000558815 BMT2Q1RMZ1 405 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 SLC5A9Q2M3M2 681 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 SLC39A12Q504Y0 691 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 IQCEQ6IPM2 695 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 BMP8AQ7Z5Y6 402 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 HS6ST3Q8IZP7 471 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 FBXL6Q8N531 539 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 XXYLT1Q8NBI6 393 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 ATAD1Q8NBU5 361 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 CCDC47Q96A33 483 aaKnown RBP16.49■□□□□ 0.23
RPL28-207ENST00000558815 CCDC127Q96BQ5 260 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 MCRS1Q96EZ8 462 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 ZNF512Q96ME7 567 aaPredicted RBP16.49■□□□□ 0.23
RPL28-207ENST00000558815 MFSD1Q9H3U5 465 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 KIAA1586Q9HCI6 787 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 INTS13Q9NVM9 706 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 FBXL21Q9UKT6 434 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 ITGA11Q9UKX5 1188 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 DUSP12Q9UNI6 340 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 NUMBLQ9Y6R0 609 aa16.49■□□□□ 0.23
RPL28-207ENST00000558815 MTMR11A4FU01 709 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 GOLGA6L4A6NEF3 574 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 EXOC3O60645 756 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 SOAT2O75908 522 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 VNN2O95498 520 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 CFHP08603 1231 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 MYL4P12829 197 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 CEBPBP17676 345 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 TNNI1P19237 187 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 RBP5P82980 135 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 HTR4Q13639 388 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 KRBA2Q6ZNG9 492 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 PDZD4Q76G19 769 aaPredicted RBP16.48■□□□□ 0.23
RPL28-207ENST00000558815 NPAS3Q8IXF0 933 aa16.48■□□□□ 0.23
RPL28-207ENST00000558815 TTC9BQ8N6N2 239 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms