RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 FBXL5Q9UKA1 691 aa13.45□□□□□ -0.26
LRRC28-206ENST00000558471 R3HCC1Q9Y3T6 440 aaKnown RBP13.45□□□□□ -0.26
LRRC28-206ENST00000558471 SLC16A3O15427 465 aaKnown RBP13.44□□□□□ -0.26
LRRC28-206ENST00000558471 C1RP00736 705 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 CYP11A1P05108 521 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 SRGAP2BP0DMP2 458 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 KCNQ1P51787 676 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 MYL6P60660 151 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 ENPEPQ07075 957 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 PPP3CAQ08209 521 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 MYO1EQ12965 1108 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 BIRC3Q13489 604 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 TRPC3Q13507 836 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 ZACNQ401N2 412 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 WSCD1Q658N2 575 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 OVOS1Q6IE37 1185 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 SLC8B1Q6J4K2 584 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 ZNF280DQ6N043 979 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 C15orf39Q6ZRI6 1047 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 SV2AQ7L0J3 742 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 FILIP1Q7Z7B0 1213 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 C12orf76Q8N812 135 aaPredicted RBP13.44□□□□□ -0.26
LRRC28-206ENST00000558471 CEP63Q96MT8 703 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 ASB2Q96Q27 587 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 APOL5Q9BWW9 433 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 SRRTQ9BXP5 876 aaKnown RBP13.44□□□□□ -0.26
LRRC28-206ENST00000558471 S1PR5Q9H228 398 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 GDAP2Q9NXN4 497 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 TMEM63CQ9P1W3 806 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 RWDD2AQ9UIY3 292 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 CD207Q9UJ71 328 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 DSEQ9UL01 958 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 SNX9Q9Y5X1 595 aa13.44□□□□□ -0.26
LRRC28-206ENST00000558471 ARHGEF37A1IGU5 675 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 WDR27A2RRH5 827 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 VNN1O95497 513 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 HOXB8P17481 243 aaPredicted RBP13.43□□□□□ -0.26
LRRC28-206ENST00000558471 GCLMP48507 274 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 ARPP19P56211 112 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 ROR1Q01973 937 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 NCOA4Q13772 614 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 AAK1Q2M2I8 961 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 CCDC183Q5T5S1 534 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 METTL23Q86XA0 190 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 KREMEN2Q8NCW0 462 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 FEZF2Q8TBJ5 459 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 RTP3Q9BQQ7 232 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 XYLT2Q9H1B5 865 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 MMRN2Q9H8L6 949 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 MAN1C1Q9NR34 630 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 L1RE1Q9UN81 338 aa13.43□□□□□ -0.26
LRRC28-206ENST00000558471 DOCK6Q96HP0 2047 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 XIRP2A4UGR9 3374 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 C2orf16Q68DN1 1984 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 MBTPS2O43462 519 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 HUS1O60921 280 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 ABLIM3O94929 683 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 STAU1O95793 577 aaKnown RBP13.42□□□□□ -0.26
LRRC28-206ENST00000558471 OR4Q2P0C623 313 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 BMP1P13497 986 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 ATICP31939 592 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 SOWAHAQ2M3V2 549 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 WDR72Q3MJ13 1102 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 PTCRAQ6ISU1 281 aaPredicted RBP13.42□□□□□ -0.26
LRRC28-206ENST00000558471 LIMS2Q7Z4I7 341 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 FRMD5Q7Z6J6 570 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 PDCL2Q8N4E4 241 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 TOP6BLQ8N6T0 577 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 SMRP1Q8NCR6 262 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 ZNF461Q8TAF7 563 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 HDAC7Q8WUI4 952 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 SYAP1Q96A49 352 aaPredicted RBP13.42□□□□□ -0.26
LRRC28-206ENST00000558471 ELMO3Q96BJ8 720 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 TMEM209Q96SK2 561 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 OXCT2Q9BYC2 517 aaPredicted RBP13.42□□□□□ -0.26
LRRC28-206ENST00000558471 PLEKHA4Q9H4M7 779 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 METTL14Q9HCE5 456 aaKnown RBP13.42□□□□□ -0.26
LRRC28-206ENST00000558471 DZANK1Q9NVP4 752 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 ARMCX3Q9UH62 379 aaPredicted RBP13.42□□□□□ -0.26
LRRC28-206ENST00000558471 FBXW11Q9UKB1 542 aa13.42□□□□□ -0.26
LRRC28-206ENST00000558471 SPTBN5Q9NRC6 3674 aaKnown RBP13.41□□□□□ -0.26
LRRC28-206ENST00000558471 OR6C75A6NL08 312 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 LRRN2O75325 713 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 RFPL2O75678 378 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 HLA-DRAP01903 254 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 IL9P15248 144 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 GTF2H1P32780 548 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 SMAD4Q13485 552 aaKnown RBP13.41□□□□□ -0.26
LRRC28-206ENST00000558471 SGSM1Q2NKQ1 1148 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 PUS10Q3MIT2 529 aaKnown RBP13.41□□□□□ -0.26
LRRC28-206ENST00000558471 CCDC40Q4G0X9 1142 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 DCAF17Q5H9S7 520 aaPredicted RBP13.41□□□□□ -0.26
LRRC28-206ENST00000558471 RARS2Q5T160 578 aaKnown RBP13.41□□□□□ -0.26
LRRC28-206ENST00000558471 TCERG1LQ5VWI1 586 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 TMC5Q6UXY8 1006 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 DPH6Q7L8W6 267 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 OSTM1Q86WC4 334 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 THEM5Q8N1Q8 247 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 TMEM86AQ8N2M4 240 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms