RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SLC16A1P53985 500 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 OR8H2Q8N162 312 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 TASP1Q9H6P5 420 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 WEE2P0C1S8 567 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 RALAP11233 206 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 PLEKHA7Q6IQ23 1121 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 SLC35G2Q8TBE7 412 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 DIS3LQ8TF46 1054 aaKnown RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 OTUB1Q96FW1 271 aaPredicted RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 ZNF512Q96ME7 567 aaPredicted RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 RAD51CO43502 376 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 PRKCBP05771 671 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 VEPH1Q14D04 833 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 TRIP4Q15650 581 aaPredicted RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 KYNUQ16719 465 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 SH3BP5LQ7L8J4 393 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 NSL1Q96IY1 281 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 SCARF1Q14162 830 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 ZC2HC1CQ53FD0 456 aaPredicted RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 FGD2Q7Z6J4 655 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 GPD1LQ8N335 351 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 RBM15Q96T37 977 aaKnown RBP eCLIP14.59□□□□□ -0.079e-7■■■■□ 22.2
SPG11-210ENST00000558319 DCP1AQ9NPI6 582 aaPredicted RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 BFARQ9NZS9 450 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 C5orf58C9J3I9 102 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 NDUFB5O43674 189 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 KRT7P08729 469 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 NME5P56597 212 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 OTUD4Q01804 1114 aaKnown RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 TAF1CQ15572 869 aaPredicted RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 H2AFY2Q9P0M6 372 aaPredicted RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 COL15A1P39059 1388 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 NFKBIAP25963 317 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 EIF2B2P49770 351 aaKnown RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 USP1O94782 785 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 ATN1P54259 1190 aaPredicted RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 CCZ1BP86790 482 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 CCZ1P86791 482 aaPredicted RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 LDHDQ86WU2 507 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 ANKRD7Q92527 254 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 DDX56Q9NY93 547 aaKnown RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 UBAP1Q9NZ09 502 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 AXIN2Q9Y2T1 843 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 UTYO14607 1347 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 GUCA1CO95843 209 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 MZF1P28698 734 aaPredicted RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 PTK7Q13308 1070 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 CHI3L2Q15782 390 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 PTGISQ16647 500 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 C2CD6Q53TS8 623 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 UNKQ9C0B0 810 aaKnown RBP14.59□□□□□ -0.07
SPG11-210ENST00000558319 DTNAQ9Y4J8 743 aa14.59□□□□□ -0.07
SPG11-210ENST00000558319 TAL1P17542 331 aaPredicted RBP14.58□□□□□ -0.07
SPG11-210ENST00000558319 ABCE1P61221 599 aaKnown RBP14.58□□□□□ -0.07
SPG11-210ENST00000558319 PODNQ7Z5L7 613 aa14.58□□□□□ -0.07
SPG11-210ENST00000558319 CDKL3Q8IVW4 592 aaPredicted RBP14.58□□□□□ -0.07
SPG11-210ENST00000558319 PROM2Q8N271 834 aa14.58□□□□□ -0.07
SPG11-210ENST00000558319 TMEM117Q9H0C3 514 aa14.58□□□□□ -0.07
SPG11-210ENST00000558319 DDX5P17844 614 aaKnown RBP14.58□□□□□ -0.08
SPG11-210ENST00000558319 CDH2P19022 906 aaPredicted RBP14.58□□□□□ -0.08
SPG11-210ENST00000558319 YY1P25490 414 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 PLA2G4AP47712 749 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 DNAJC3Q13217 504 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 GJB7Q6PEY0 223 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 LRIG3Q6UXM1 1119 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 SLC44A2Q8IWA5 706 aaPredicted RBP14.58□□□□□ -0.08
SPG11-210ENST00000558319 RFFLQ8WZ73 363 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 PNKPQ96T60 521 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 SMG5Q9UPR3 1016 aaKnown RBP14.58□□□□□ -0.08
SPG11-210ENST00000558319 NEU2Q9Y3R4 380 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 KRT87PA6NCN2 255 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 ALBP02768 609 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 TFRCP02786 760 aaKnown RBP14.58□□□□□ -0.08
SPG11-210ENST00000558319 NUDT2P50583 147 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 PPP1R13LQ8WUF5 828 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 ACAD9Q9H845 621 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 PKP3Q9Y446 797 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 PHF2O75151 1096 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 PARNO95453 639 aaKnown RBP14.58□□□□□ -0.08
SPG11-210ENST00000558319 KCTD21Q4G0X4 260 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 CHSY1Q86X52 802 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 P3H2Q8IVL5 708 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 ATL2Q8NHH9 583 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 SLC7A14Q8TBB6 771 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 WNK4Q96J92 1243 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 CD274Q9NZQ7 290 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 PSMC3IPQ9P2W1 217 aaPredicted RBP14.58□□□□□ -0.08
SPG11-210ENST00000558319 CNOT7Q9UIV1 285 aaKnown RBP14.58□□□□□ -0.08
SPG11-210ENST00000558319 MROH7-TTC4A0A0A0MT08 1334 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 KBTBD13C9JR72 458 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 GGPS1O95749 300 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 MYL2P10916 166 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 ALCAMQ13740 583 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 BAATQ14032 418 aaPredicted RBP14.58□□□□□ -0.08
SPG11-210ENST00000558319 ALFQ53S48 1182 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 ANGEL2Q5VTE6 544 aaKnown RBP14.58□□□□□ -0.08
SPG11-210ENST00000558319 POTEAQ6S8J7 498 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 MAGED4Q96JG8 741 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 MANSC1Q9H8J5 431 aa14.58□□□□□ -0.08
SPG11-210ENST00000558319 GTF2A1LQ9UNN4 478 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms