RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 METTL23Q86XA0 190 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 YAF2Q8IY57 180 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 ASB16Q96NS5 453 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 FIZ1Q96SL8 496 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 FBXO2Q9UK22 296 aaPredicted RBP16.83■□□□□ 0.28
TPM1-211ENST00000558314 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.83■□□□□ 0.28
TPM1-211ENST00000558314 MTMR11A4FU01 709 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 CYB561D2O14569 222 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 MOSPD3O75425 235 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 GCNT3O95395 438 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 VNN2O95498 520 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 TYMPP19971 482 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 SYT1P21579 422 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 SCP2P22307 547 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 ABCD1P33897 745 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 AARSP49588 968 aaKnown RBP eCLIP16.82■□□□□ 0.28
TPM1-211ENST00000558314 GPR17Q13304 367 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 VITQ6UXI7 678 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 TTC9BQ8N6N2 239 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 LEMD2Q8NC56 503 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 SHKBP1Q8TBC3 707 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 SAAL1Q96ER3 474 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 DDX23Q9BUQ8 820 aaKnown RBP16.82■□□□□ 0.28
TPM1-211ENST00000558314 DPP3Q9NY33 737 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 STK17AQ9UEE5 414 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 MAFFQ9ULX9 164 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 MRPS17Q9Y2R5 130 aaKnown RBP16.82■□□□□ 0.28
TPM1-211ENST00000558314 MYO15AQ9UKN7 3530 aa16.82■□□□□ 0.28
TPM1-211ENST00000558314 MYMKA6NI61 221 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 ZNF263O14978 683 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 NCAM2O15394 837 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 PSMC3P17980 439 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 STAT6P42226 847 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 TAF12Q16514 161 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 MGAT5BQ3V5L5 792 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 STXBP5Q5T5C0 1151 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 CENPPQ6IPU0 288 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 TSSK4Q6SA08 328 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 ZNF720Q7Z2F6 126 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 SYCP3Q8IZU3 236 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 PDILTQ8N807 584 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 OR10T2Q8NGX3 314 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 TTC8Q8TAM2 541 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 IRF7Q92985 503 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 ACCSQ96QU6 501 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 FAM213AQ9BRX8 229 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 OXCT2Q9BYC2 517 aaPredicted RBP16.81■□□□□ 0.28
TPM1-211ENST00000558314 DNAJC25Q9H1X3 360 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 ATXN3LQ9H3M9 355 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 EXOC7Q9UPT5 735 aa16.81■□□□□ 0.28
TPM1-211ENST00000558314 SRPRBQ9Y5M8 271 aaKnown RBP16.81■□□□□ 0.28
TPM1-211ENST00000558314 MIA3Q5JRA6 1907 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 FAM186AA6NE01 2351 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 GOLGA8IPA6NC78 632 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 GOLGA8JA6NMD2 632 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 HEPACAM2A8MVW5 462 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 PIRO00625 290 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 DPYSL4O14531 572 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 MICAL2O94851 1124 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 TAF6P49848 677 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 TFAMQ00059 246 aaKnown RBP16.8■□□□□ 0.28
TPM1-211ENST00000558314 KCNA1Q09470 495 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 MYBPC2Q14324 1141 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 FOXD4L5Q5VV16 416 aaPredicted RBP16.8■□□□□ 0.28
TPM1-211ENST00000558314 KIAA2013Q8IYS2 634 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 THEM5Q8N1Q8 247 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 CSGALNACT1Q8TDX6 532 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 GIPC2Q8TF65 315 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 FOXD4L4Q8WXT5 416 aaPredicted RBP16.8■□□□□ 0.28
TPM1-211ENST00000558314 DNASE1L2Q92874 299 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 TSPAN18Q96SJ8 248 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 LPIN3Q9BQK8 851 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 ASB7Q9H672 318 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 ZNF334Q9HCZ1 680 aaPredicted RBP16.8■□□□□ 0.28
TPM1-211ENST00000558314 DERAQ9Y315 318 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 PIAS3Q9Y6X2 628 aa16.8■□□□□ 0.28
TPM1-211ENST00000558314 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
TPM1-211ENST00000558314 ADRB2P07550 413 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 GAP43P17677 238 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 GABRR2P28476 465 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 KPNA1P52294 538 aaPredicted RBP16.79■□□□□ 0.28
TPM1-211ENST00000558314 VEPH1Q14D04 833 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 POSTNQ15063 836 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 ARHGAP15Q53QZ3 475 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 GPR158Q5T848 1215 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 WSCD1Q658N2 575 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 CCDC73Q6ZRK6 1079 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 DNAJB7Q7Z6W7 309 aaPredicted RBP16.79■□□□□ 0.28
TPM1-211ENST00000558314 TMC8Q8IU68 726 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 EFCAB13Q8IY85 973 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 MAML2Q8IZL2 1156 aaPredicted RBP16.79■□□□□ 0.28
TPM1-211ENST00000558314 ZSWIM2Q8NEG5 633 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 DEPDC1BQ8WUY9 529 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 FAM3CQ92520 227 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 KCNN1Q92952 543 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 FAM84AQ96KN4 292 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 USP28Q96RU2 1077 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 NELL2Q99435 816 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 OSBPL6Q9BZF3 934 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 PCIF1Q9H4Z3 704 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms