RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 A0A1W2PPM1 405 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 C2orf71A6NGG8 1288 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SIGLEC16A6NMB1 481 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 hCG_1984214I3L0E3 225 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 HNRNPRO43390 633 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 HNRNPCL1O60812 293 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SGPL1O95470 568 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 KRT4P19013 534 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 AMPD1P23109 780 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SERPINB3P29508 390 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SIX1Q15475 284 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 DBN1Q16643 649 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 DAB2IPQ5VWQ8 1189 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 RINLQ6ZS11 566 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ZNF804AQ7Z570 1209 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 LCA5Q86VQ0 697 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SESTD1Q86VW0 696 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ZNF713Q8N859 430 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 GATA6Q92908 595 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ABTB1Q969K4 478 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 NMD3Q96D46 503 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 IFT43Q96FT9 208 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 DDX27Q96GQ7 796 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 KLF6Q99612 283 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 GPR88Q9GZN0 384 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ELP3Q9H9T3 547 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 TMEM165Q9HC07 324 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SAR1AQ9NR31 198 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 DNAAF2Q9NVR5 837 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 NDE1Q9NXR1 346 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ARMCX1Q9P291 453 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 STX18Q9P2W9 335 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ZNF212Q9UDV6 495 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 RPL26L1Q9UNX3 145 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SMG5Q9UPR3 1016 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 RABGAP1Q9Y3P9 1069 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ACTL7BQ9Y614 415 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ANKRD36CQ5JPF3 1778 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ZMYM2Q9UBW7 1377 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 MYO3BQ8WXR4 1341 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 PNMA6FA0A0J9YX94 578 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 H3BRJ5 948 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 C2CD2LO14523 706 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 TGFB1I1O43294 461 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 CHMP2AO43633 222 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 PIAS1O75925 651 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 FAM200BP0CF97 657 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 EEF2P13639 858 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ADRA1DP25100 572 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 MAPK4P31152 587 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 MAN1A1P33908 653 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 PSMC4P43686 418 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 CACNB3P54284 484 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 USP46P62068 366 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SREBF2Q12772 1141 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 PTK6Q13882 451 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 MAPK6Q16659 721 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 P3H1Q32P28 736 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 WDR72Q3MJ13 1102 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 LIN52Q52LA3 116 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 HYIQ5T013 277 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 TMEM63BQ5T3F8 832 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ACBD5Q5T8D3 534 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 TTBK2Q6IQ55 1244 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 RHBDF2Q6PJF5 856 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SDCCAG8Q86SQ7 713 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SLFN12Q8IYM2 578 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ADGRF4Q8IZF3 695 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 PPM1KQ8N3J5 372 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ZNF513Q8N8E2 541 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ATL2Q8NHH9 583 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 NEDD1Q8NHV4 660 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 OLIG1Q8TAK6 271 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 FNBP1Q96RU3 617 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ASCC2Q9H1I8 757 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 DEFB129Q9H1M3 183 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 C12orf65Q9H3J6 166 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 MMADHCQ9H3L0 296 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 PCIF1Q9H4Z3 704 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 RIOX1Q9H6W3 641 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 LNPEPQ9UIQ6 1025 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ANAPC7Q9UJX3 599 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 CHMP2BQ9UQN3 213 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 CSADQ9Y600 493 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 NUP98P52948 1817 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 A6NJR5 290 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L10C9JJH3 530 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 GOLGA8SH3BPF8 625 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 GOLGA8MH3BSY2 632 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 TRAFD1O14545 582 aaPredicted RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 TP73O15350 636 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 CYP26A1O43174 497 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 USP1O94782 785 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 CYP1A1P04798 512 aaPredicted RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ENO1P06733 434 aaKnown RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ZNF76P36508 570 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 GCLMP48507 274 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 TCP10Q12799 353 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms