RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 OAZ2O95190 189 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 STAU1O95793 577 aaKnown RBP27.45■■□□□ 1.98
SMAD6-202ENST00000557916 HLA-DRAP01903 254 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 CYP11A1P05108 521 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 PIK3CAP42336 1068 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 MXI1P50539 228 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 ADAM15Q13444 863 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 COL19A1Q14993 1142 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 CTXN3Q4LDR2 81 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 OVOS1Q6IE37 1185 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 LLGL2Q6P1M3 1020 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 METTL23Q86XA0 190 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 CREBRFQ8IUR6 639 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 ENOX1Q8TC92 643 aaKnown RBP27.45■■□□□ 1.98
SMAD6-202ENST00000557916 PABPC5Q96DU9 382 aaKnown RBP27.45■■□□□ 1.98
SMAD6-202ENST00000557916 CNOT6LQ96LI5 555 aaKnown RBP27.45■■□□□ 1.98
SMAD6-202ENST00000557916 XYLT2Q9H1B5 865 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 THAP9Q9H5L6 903 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 HCFC2Q9Y5Z7 792 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 CDY1Q9Y6F8 540 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 CLSTN1O94985 981 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 CTC1Q2NKJ3 1217 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 SGSM1Q2NKQ1 1148 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 ZNF699Q32M78 642 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 WDR72Q3MJ13 1102 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 WSCD1Q658N2 575 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 RSPO2Q6UXX9 243 aaPredicted RBP27.44■■□□□ 1.98
SMAD6-202ENST00000557916 EP400NLQ6ZTU2 488 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 PALB2Q86YC2 1186 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 IRF2BP1Q8IU81 584 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 TRIM59Q8IWR1 403 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 VN1R2Q8NFZ6 395 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 TAS1R2Q8TE23 839 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 FBXL5Q9UKA1 691 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 L1RE1Q9UN81 338 aa27.44■■□□□ 1.98
SMAD6-202ENST00000557916 ADAM12O43184 909 aa27.43■■□□□ 1.98
SMAD6-202ENST00000557916 TBC1D4O60343 1298 aa27.43■■□□□ 1.98
SMAD6-202ENST00000557916 OR1D2P34982 312 aa27.43■■□□□ 1.98
SMAD6-202ENST00000557916 CLCN4P51793 760 aa27.43■■□□□ 1.98
SMAD6-202ENST00000557916 RBM10P98175 930 aaKnown RBP27.43■■□□□ 1.98
SMAD6-202ENST00000557916 KCNC3Q14003 757 aa27.43■■□□□ 1.98
SMAD6-202ENST00000557916 TOP6BLQ8N6T0 577 aa27.43■■□□□ 1.98
SMAD6-202ENST00000557916 SLC22A17Q8WUG5 538 aa27.43■■□□□ 1.98
SMAD6-202ENST00000557916 VRTNQ9H8Y1 702 aa27.43■■□□□ 1.98
SMAD6-202ENST00000557916 ANO6Q4KMQ2 910 aa27.42■■□□□ 1.98
SMAD6-202ENST00000557916 CBWD6Q4V339 395 aa27.42■■□□□ 1.98
SMAD6-202ENST00000557916 CBWD3Q5JTY5 395 aa27.42■■□□□ 1.98
SMAD6-202ENST00000557916 CBWD5Q5RIA9 395 aa27.42■■□□□ 1.98
SMAD6-202ENST00000557916 FAM114A1Q8IWE2 563 aa27.42■■□□□ 1.98
SMAD6-202ENST00000557916 PDCL2Q8N4E4 241 aa27.42■■□□□ 1.98
SMAD6-202ENST00000557916 TAF4BQ92750 862 aa27.42■■□□□ 1.98
SMAD6-202ENST00000557916 HLA-CQ95604 372 aa27.42■■□□□ 1.98
SMAD6-202ENST00000557916 MMS19Q96T76 1030 aa27.42■■□□□ 1.98
SMAD6-202ENST00000557916 OXCT2Q9BYC2 517 aaPredicted RBP27.42■■□□□ 1.98
SMAD6-202ENST00000557916 NAT10Q9H0A0 1025 aaKnown RBP27.42■■□□□ 1.98
SMAD6-202ENST00000557916 NXF1Q9UBU9 619 aaKnown RBP27.42■■□□□ 1.98
SMAD6-202ENST00000557916 NFE2L3Q9Y4A8 694 aa27.42■■□□□ 1.98
SMAD6-202ENST00000557916 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.42■■□□□ 1.98
SMAD6-202ENST00000557916 GLP2RO95838 553 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 GLUD1P00367 558 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 SRGAP2BP0DMP2 458 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 EPCAMP16422 314 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 TNNC1P63316 161 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 SOWAHAQ2M3V2 549 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 ZSCAN23Q3MJ62 389 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 ZNF667Q5HYK9 610 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 SLC8B1Q6J4K2 584 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 DPH6Q7L8W6 267 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 TMEM86AQ8N2M4 240 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 FBXL13Q8NEE6 735 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 ELMO3Q96BJ8 720 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 FUCA2Q9BTY2 467 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 IMPG2Q9BZV3 1241 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 COL6A3P12111 3177 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 TGM5O43548 720 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 ASS1P00966 412 aaKnown RBP27.41■■□□□ 1.98
SMAD6-202ENST00000557916 FMO5P49326 533 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 ARPP19P56211 112 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 RAB33AQ14088 237 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 HSP90AA4PQ58FG1 418 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 TMEM184AQ6ZMB5 413 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 LIMS2Q7Z4I7 341 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 THEM5Q8N1Q8 247 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 CASP10Q92851 521 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 PI4K2AQ9BTU6 479 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 UBE2ZQ9H832 354 aaPredicted RBP27.41■■□□□ 1.98
SMAD6-202ENST00000557916 PRDM6Q9NQX0 595 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 SAMSN1Q9NSI8 373 aaKnown RBP27.41■■□□□ 1.98
SMAD6-202ENST00000557916 MAGEC2Q9UBF1 373 aaPredicted RBP27.41■■□□□ 1.98
SMAD6-202ENST00000557916 COG5Q9UP83 839 aa27.41■■□□□ 1.98
SMAD6-202ENST00000557916 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.4■■□□□ 1.98
SMAD6-202ENST00000557916 OR6C75A6NL08 312 aa27.4■■□□□ 1.98
SMAD6-202ENST00000557916 C1RP00736 705 aa27.4■■□□□ 1.98
SMAD6-202ENST00000557916 LTBRP36941 435 aa27.4■■□□□ 1.98
SMAD6-202ENST00000557916 KCNH2Q12809 1159 aa27.4■■□□□ 1.98
SMAD6-202ENST00000557916 LILRA6Q6PI73 481 aa27.4■■□□□ 1.98
SMAD6-202ENST00000557916 ADGRF2Q8IZF7 708 aa27.4■■□□□ 1.98
SMAD6-202ENST00000557916 CCDC150Q8NCX0 1101 aa27.4■■□□□ 1.98
SMAD6-202ENST00000557916 SEMA4DQ92854 862 aa27.4■■□□□ 1.98
SMAD6-202ENST00000557916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.4■■□□□ 1.983e-6■■■■■ 130.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms