RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 SLC26A6Q9BXS9 759 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 PACSIN1Q9BY11 444 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 EIF2AQ9BY44 585 aaKnown RBP3.68□□□□□ -1.82
TRAV28-201ENST00000557548 MAGEB5Q9BZ81 275 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.68□□□□□ -1.82
TRAV28-201ENST00000557548 KIAA1683Q9H0B3 1180 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 CHST8Q9H2A9 424 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 BRD9Q9H8M2 597 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 PCDH18Q9HCL0 1135 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 MOCS1Q9NZB8 636 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 SLC23A1Q9UHI7 598 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 NRBP1Q9UHY1 535 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 FBXO2Q9UK22 296 aaPredicted RBP3.68□□□□□ -1.82
TRAV28-201ENST00000557548 HDAC9Q9UKV0 1011 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 SCAF8Q9UPN6 1271 aaKnown RBP3.68□□□□□ -1.82
TRAV28-201ENST00000557548 IRS2Q9Y4H2 1338 aa3.68□□□□□ -1.82
TRAV28-201ENST00000557548 ZMYM3Q14202 1370 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 A0A087WZ62 844 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 TCRBV7S2A1N4TA0A589 114 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 MBD3L4A6NDZ8 208 aaPredicted RBP3.67□□□□□ -1.82
TRAV28-201ENST00000557548 MBD3L3A6NE82 208 aaPredicted RBP3.67□□□□□ -1.82
TRAV28-201ENST00000557548 TISP43B9A030 160 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 B9A039 149 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 hCG_1984214I3L0E3 225 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 OVOL3O00110 214 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 HRKO00198 91 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 AREL1O15033 823 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 MTSS1O43312 755 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 ASNA1O43681 348 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 RASSF9O75901 435 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 DNAJB5O75953 348 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 CD4P01730 458 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 GNAI2P04899 355 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 INHBBP09529 407 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 RARBP10826 455 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 MTHFD1P11586 935 aaKnown RBP3.67□□□□□ -1.82
TRAV28-201ENST00000557548 GABRB3P28472 473 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 CASRP41180 1078 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 RAP1GAPP47736 663 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 SLC11A2P49281 568 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 MRE11P49959 708 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 RRADP55042 308 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 UCP3P55916 312 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 PSMC1P62191 440 aaKnown RBP3.67□□□□□ -1.82
TRAV28-201ENST00000557548 SRSF3P84103 164 aaKnown RBP3.67□□□□□ -1.82
TRAV28-201ENST00000557548 ACAP1Q15027 740 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 MFSD14BQ5SR56 506 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 SULT6B1Q6IMI4 303 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 RETSATQ6NUM9 610 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 USP49Q70CQ1 688 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 GGNQ86UU5 652 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 MOGAT3Q86VF5 341 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 LDHDQ86WU2 507 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 TMTC1Q8IUR5 882 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 TMTC2Q8N394 836 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 ESX1Q8N693 406 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 SLC15A4Q8N697 577 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 DNAJC5GQ8N7S2 189 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 VGLL2Q8N8G2 317 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 CCDC150Q8NCX0 1101 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 IL17RDQ8NFM7 739 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 NUDT10Q8NFP7 164 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 STT3BQ8TCJ2 826 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 ASB12Q8WXK4 309 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 RUBCNQ92622 972 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 RILPL2Q969X0 211 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 ZBTB8AQ96BR9 441 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 NUDT11Q96G61 164 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 CNPPD1Q9BV87 410 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 KATNBL1Q9H079 304 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 ZNF552Q9H707 407 aaPredicted RBP3.67□□□□□ -1.82
TRAV28-201ENST00000557548 A1CFQ9NQ94 594 aaKnown RBP3.67□□□□□ -1.82
TRAV28-201ENST00000557548 RGL1Q9NZL6 768 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 CFAP97Q9P2B7 532 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 MID2Q9UJV3 735 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 SLC45A2Q9UMX9 530 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 CTDP1Q9Y5B0 961 aaPredicted RBP3.67□□□□□ -1.82
TRAV28-201ENST00000557548 PCDHA5Q9Y5H7 936 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 CARMIL2Q6F5E8 1435 aa3.67□□□□□ -1.82
TRAV28-201ENST00000557548 A0A087WWL8 130 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 A0A0B4J269 797 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 ZNF785A8K8V0 405 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 MYO1CO00159 1063 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 SLC43A1O75387 559 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 CYP7B1O75881 506 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 GRPP07492 148 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 ITGA5P08648 1049 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 TXNP10599 105 aaKnown RBP3.66□□□□□ -1.82
TRAV28-201ENST00000557548 PFKLP17858 780 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 ATP5JP18859 108 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 IL1R2P27930 398 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 SLC6A4P31645 630 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 LIMS1P48059 325 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 RXRGP48443 463 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 CDR1P51861 262 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 BPIFB4P59827 614 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 POU6F2P78424 691 aaPredicted RBP3.66□□□□□ -1.82
TRAV28-201ENST00000557548 KCTD2Q14681 263 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 FBXO47Q5MNV8 452 aa3.66□□□□□ -1.82
TRAV28-201ENST00000557548 FAM26FQ5R3K3 315 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms