RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 AMHR2Q16671 573 aa10.41□□□□□ -0.74
NEDD1-211ENST00000557454 CD300LGQ6UXG3 332 aa10.41□□□□□ -0.74
NEDD1-211ENST00000557454 ANO5Q75V66 913 aa10.41□□□□□ -0.74
NEDD1-211ENST00000557454 RALYLQ86SE5 291 aaKnown RBP10.41□□□□□ -0.74
NEDD1-211ENST00000557454 SLC7A3Q8WY07 619 aa10.41□□□□□ -0.74
NEDD1-211ENST00000557454 GJA10Q969M2 543 aa10.41□□□□□ -0.74
NEDD1-211ENST00000557454 TRIM4Q9C037 500 aa10.41□□□□□ -0.74
NEDD1-211ENST00000557454 SMG9Q9H0W8 520 aaKnown RBP10.41□□□□□ -0.74
NEDD1-211ENST00000557454 WDR70Q9NW82 654 aa10.41□□□□□ -0.74
NEDD1-211ENST00000557454 TOR4AQ9NXH8 423 aa10.41□□□□□ -0.74
NEDD1-211ENST00000557454 NXF1Q9UBU9 619 aaKnown RBP10.41□□□□□ -0.74
NEDD1-211ENST00000557454 YIPF1Q9Y548 306 aa10.41□□□□□ -0.74
NEDD1-211ENST00000557454 TAF6LQ9Y6J9 622 aa10.41□□□□□ -0.74
NEDD1-211ENST00000557454 TNRC6BQ9UPQ9 1833 aaKnown RBP10.41□□□□□ -0.74
NEDD1-211ENST00000557454 GOLGA8CPA6NN73 597 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 TMEM189-UBE2V1I3L0A0 370 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 MSH4O15457 936 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 RRP8O43159 456 aaKnown RBP10.4□□□□□ -0.74
NEDD1-211ENST00000557454 ATXN1LP0C7T5 689 aaKnown RBP10.4□□□□□ -0.74
NEDD1-211ENST00000557454 KRT10P13645 584 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 C6P13671 934 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 HLA-EP13747 358 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 ARSAP15289 507 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 CXADRP78310 365 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 LY6DQ14210 128 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 NBR1Q14596 966 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 GPR158Q5T848 1215 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 TPGS2Q68CL5 300 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 LMBRD2Q68DH5 695 aaPredicted RBP10.4□□□□□ -0.74
NEDD1-211ENST00000557454 SLC27A1Q6PCB7 646 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 TMTC3Q6ZXV5 915 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 MIER3Q7Z3K6 550 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 TEX2Q8IWB9 1127 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 GALNT15Q8N3T1 639 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 DEFB119Q8N690 84 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 C3orf58Q8NDZ4 430 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 FAM83CQ9BQN1 747 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 THG1LQ9NWX6 298 aaKnown RBP10.4□□□□□ -0.74
NEDD1-211ENST00000557454 TPCN1Q9ULQ1 816 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 SRPK3Q9UPE1 567 aa10.4□□□□□ -0.74
NEDD1-211ENST00000557454 ANTXRLA6NF34 631 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 PLK4O00444 970 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 ADAMTS3O15072 1205 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 TBX3O15119 743 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 DKK1O94907 266 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 SYPP08247 313 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 PRKCSHP14314 528 aaPredicted RBP10.39□□□□□ -0.75
NEDD1-211ENST00000557454 HNRNPLP14866 589 aaKnown RBP eCLIP10.39□□□□□ -0.75
NEDD1-211ENST00000557454 IL12RB1P42701 662 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 CLCNKBP51801 687 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 PTENP60484 403 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 MBTD1Q05BQ5 628 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 PCBP1Q15365 356 aaKnown RBP eCLIP10.39□□□□□ -0.75
NEDD1-211ENST00000557454 C2orf27AQ580R0 203 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 C20orf194Q5TEA3 1177 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 LRCH2Q5VUJ6 765 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 GAREM2Q75VX8 874 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 PRICKLE2Q7Z3G6 844 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 FERMT3Q86UX7 667 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 ZNF513Q8N8E2 541 aaPredicted RBP10.39□□□□□ -0.75
NEDD1-211ENST00000557454 KIF2CQ99661 725 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 TEKT3Q9BXF9 490 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 DNAJC25Q9H1X3 360 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 ATXN3LQ9H3M9 355 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 DHX33Q9H6R0 707 aaKnown RBP10.39□□□□□ -0.75
NEDD1-211ENST00000557454 DIAPH3Q9NSV4 1193 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 ANKMY1Q9P2S6 941 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 AFF4Q9UHB7 1163 aaKnown RBP10.39□□□□□ -0.75
NEDD1-211ENST00000557454 FBXL5Q9UKA1 691 aa10.39□□□□□ -0.75
NEDD1-211ENST00000557454 CNTNAP5Q8WYK1 1306 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 TRAPPC3O43617 180 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 RECQL4O94761 1208 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 CYP21A2P08686 494 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 SEC13P55735 322 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 CYP4F8P98187 520 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 AMPD2Q01433 879 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 SEMG2Q02383 582 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 MAP7D1Q3KQU3 841 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 GLRA4Q5JXX5 417 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 SPDYCQ5MJ68 293 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 NFXL1Q6ZNB6 911 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 RABEPKQ7Z6M1 372 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 CCDC33Q8N5R6 958 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 RDM1Q8NG50 284 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 NCOA7Q8NI08 942 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 USP33Q8TEY7 942 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 WHAMMQ8TF30 809 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 SETD7Q8WTS6 366 aaKnown RBP10.38□□□□□ -0.75
NEDD1-211ENST00000557454 SLC5A5Q92911 643 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 CD101Q93033 1021 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 NXPE2Q96DL1 559 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 RIT2Q99578 217 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 IL25Q9H293 177 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 PRDM16Q9HAZ2 1276 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 GOLGA2P5Q9HBQ8 144 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 IL17BQ9UHF5 180 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 TBX20Q9UMR3 447 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 C2CD3Q4AC94 2353 aa10.38□□□□□ -0.75
NEDD1-211ENST00000557454 FLNCQ14315 2725 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms