RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 MYO16Q9Y6X6 1858 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 CYB561D2O14569 222 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 ADAM12O43184 909 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 TGM5O43548 720 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 PHACTR2O75167 634 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 SPATA31D3P0C874 917 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 TRIM49P0CI25 452 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 TRIM49CP0CI26 452 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 TYMPP19971 482 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 OR1D2P34982 312 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 AP3M2P53677 418 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 ARPP19P56211 112 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 STX17P56962 302 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 FKBP3Q00688 224 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 TDRD10Q5VZ19 366 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 OVOS1Q6IE37 1185 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 PTCRAQ6ISU1 281 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 RSPO2Q6UXX9 243 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 SPATA31D4Q6ZUB0 917 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 SMRP1Q8NCR6 262 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 TMC2Q8TDI7 906 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 ZNF516Q92618 1163 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 HPDLQ96IR7 371 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 MSLNLQ96KJ4 702 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 ASB2Q96Q27 587 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 MMRN2Q9H8L6 949 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 SFXN1Q9H9B4 322 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 FBXL5Q9UKA1 691 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 SNX9Q9Y5X1 595 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 TTC28Q96AY4 2481 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 PATJQ8NI35 1801 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 MYO10Q9HD67 2058 aa11.39□□□□□ -0.59
HNRNPC-232ENST00000557442 SLC16A3O15427 465 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 OAZ2O95190 189 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 CPB1P15086 417 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 HOXB8P17481 243 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 CLDN10P78369 228 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 ROR1Q01973 937 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 SMAD4Q13485 552 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 TRPC3Q13507 836 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 RAB33AQ14088 237 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 MRPL58Q14197 206 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 DPCR1Q3MIW9 517 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 DCAF17Q5H9S7 520 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 RARS2Q5T160 578 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 LIN9Q5TKA1 542 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 SLC8B1Q6J4K2 584 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 TTI2Q6NXR4 508 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 SYCE2Q6PIF2 218 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 METTL23Q86XA0 190 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 ZC3H3Q8IXZ2 948 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 DPP7Q9UHL4 492 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 FBXW11Q9UKB1 542 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 DSEQ9UL01 958 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 FAM50BQ9Y247 325 aa11.38□□□□□ -0.59
HNRNPC-232ENST00000557442 WDR27A2RRH5 827 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 IKBKBO14920 756 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 MBTPS2O43462 519 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 TBC1D4O60343 1298 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 HUS1O60921 280 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 CYP11A1P05108 521 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 IL9P15248 144 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 PIK3CAP42336 1068 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 MYL6P60660 151 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 NCOA4Q13772 614 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 PUS10Q3MIT2 529 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 ZACNQ401N2 412 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 CCDC40Q4G0X9 1142 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 TJAP1Q5JTD0 557 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 C1orf220Q5T0J3 134 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 CCDC183Q5T5S1 534 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 TCERG1LQ5VWI1 586 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 WSCD1Q658N2 575 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 CES5AQ6NT32 575 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 PDCL2Q8N4E4 241 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 C12orf76Q8N812 135 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 MLKLQ8NB16 471 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 KREMEN2Q8NCW0 462 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 SYAP1Q96A49 352 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 BORCS6Q96GS4 357 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 CEP63Q96MT8 703 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 DUSP9Q99956 384 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 PLEKHA4Q9H4M7 779 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 GDAP2Q9NXN4 497 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 ARMCX3Q9UH62 379 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 L1RE1Q9UN81 338 aa11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 USP15Q9Y4E8 981 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 NUP210Q8TEM1 1887 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-232ENST00000557442 GRXCR2A6NFK2 248 aa11.36□□□□□ -0.59
HNRNPC-232ENST00000557442 OR6C75A6NL08 312 aa11.36□□□□□ -0.59
HNRNPC-232ENST00000557442 RFPL2O75678 378 aa11.36□□□□□ -0.59
HNRNPC-232ENST00000557442 C1RP00736 705 aa11.36□□□□□ -0.59
HNRNPC-232ENST00000557442 CST3P01034 146 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-232ENST00000557442 C4BPAP04003 597 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-232ENST00000557442 C8AP07357 584 aa11.36□□□□□ -0.59
HNRNPC-232ENST00000557442 OR4Q2P0C623 313 aa11.36□□□□□ -0.59
HNRNPC-232ENST00000557442 GCLMP48507 274 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms