RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GUCY2CP25092 1073 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 SLC12A3P55017 1021 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 CYP4F8P98187 520 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 MCL1Q07820 350 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 DHX8Q14562 1220 aaKnown RBP15.33■□□□□ 0.04
SLIRP-210ENST00000557431 MCTP1Q6DN14 999 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 BEST2Q8NFU1 509 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 CSGALNACT1Q8TDX6 532 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 DEPDC1BQ8WUY9 529 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 SPIRE2Q8WWL2 714 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 SECISBP2LQ93073 1101 aaKnown RBP15.33■□□□□ 0.04
SLIRP-210ENST00000557431 KIF2CQ99661 725 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 LPIN3Q9BQK8 851 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 SMG9Q9H0W8 520 aaKnown RBP15.33■□□□□ 0.04
SLIRP-210ENST00000557431 GTSE1Q9NYZ3 720 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 PLA2G4BP0C869 781 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 LRPAP1P30533 357 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 CCR3P51677 355 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 KPNA1P52294 538 aaPredicted RBP15.32■□□□□ 0.04
SLIRP-210ENST00000557431 PPP2R3AQ06190 1150 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 TNK2Q07912 1038 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 ZBTB6Q15916 424 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 ENOX2Q16206 610 aaKnown RBP15.32■□□□□ 0.04
SLIRP-210ENST00000557431 ARSHQ5FYA8 562 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 GAREM2Q75VX8 874 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 USP37Q86T82 979 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 ARID3BQ8IVW6 561 aaPredicted RBP15.32■□□□□ 0.04
SLIRP-210ENST00000557431 YAF2Q8IY57 180 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 SYT2Q8N9I0 419 aaPredicted RBP15.32■□□□□ 0.04
SLIRP-210ENST00000557431 STKLD1Q8NE28 680 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 NTPCRQ9BSD7 190 aaKnown RBP15.32■□□□□ 0.04
SLIRP-210ENST00000557431 RAB23Q9ULC3 237 aa15.32■□□□□ 0.04
SLIRP-210ENST00000557431 UBQLN1Q9UMX0 589 aaKnown RBP15.32■□□□□ 0.04
SLIRP-210ENST00000557431 CNOT1A5YKK6 2376 aaKnown RBP15.32■□□□□ 0.04
SLIRP-210ENST00000557431 THADAQ6YHU6 1953 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 TISP43B9A030 160 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 HRO43593 1189 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 GDF9O60383 454 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 OAZ2O95190 189 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 PRAMEF12O95522 483 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 CLTAP09496 248 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 KCNA4P22459 653 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 GABRR2P28476 465 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 PRPHP41219 470 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 CXCL12P48061 93 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 AARSP49588 968 aaKnown RBP eCLIP15.31■□□□□ 0.04
SLIRP-210ENST00000557431 SMTNP53814 917 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 NCKAP1LP55160 1127 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 ATP2C1P98194 919 aaPredicted RBP15.31■□□□□ 0.04
SLIRP-210ENST00000557431 LMNB2Q03252 620 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 SIM2Q14190 667 aaPredicted RBP15.31■□□□□ 0.04
SLIRP-210ENST00000557431 PON2Q15165 354 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 GPR158Q5T848 1215 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 OVOS1Q6IE37 1185 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 JADE1Q6IE81 842 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 CENPPQ6IPU0 288 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 SLC39A4Q6P5W5 647 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 PKN3Q6P5Z2 889 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 ZPBP2Q6X784 338 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 HAUS6Q7Z4H7 955 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 OR10T2Q8NGX3 314 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 REEP2Q9BRK0 252 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 IKZF4Q9H2S9 585 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 ATXN3LQ9H3M9 355 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 C17orf75Q9HAS0 396 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 TRPV4Q9HBA0 871 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 STK24Q9Y6E0 443 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 PTPRDP23468 1912 aa15.31■□□□□ 0.04
SLIRP-210ENST00000557431 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.3■□□□□ 0.04
SLIRP-210ENST00000557431 SPECC1L-ADORA2AF8WAN1 911 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 K7ENM7 598 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 K7ESF4 209 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 FAM189A1O60320 539 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 NFICP08651 508 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 LIG4P49917 911 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 EPHB3P54753 998 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 GPR17Q13304 367 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 CCDC6Q16204 474 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 TMEM119Q4V9L6 283 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 HYIQ5T013 277 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 DNAJB7Q7Z6W7 309 aaPredicted RBP15.3■□□□□ 0.04
SLIRP-210ENST00000557431 ABCA7Q8IZY2 2146 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 CDK5RAP3Q96JB5 506 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 SENP8Q96LD8 212 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 ZSCAN31Q96LW9 406 aaPredicted RBP15.3■□□□□ 0.04
SLIRP-210ENST00000557431 SEPT5Q99719 369 aaPredicted RBP15.3■□□□□ 0.04
SLIRP-210ENST00000557431 FAM126AQ9BYI3 521 aaPredicted RBP15.3■□□□□ 0.04
SLIRP-210ENST00000557431 RPF1Q9H9Y2 349 aaKnown RBP15.3■□□□□ 0.04
SLIRP-210ENST00000557431 TRPV5Q9NQA5 729 aa15.3■□□□□ 0.04
SLIRP-210ENST00000557431 POLR3BQ9NW08 1133 aaPredicted RBP15.3■□□□□ 0.04
SLIRP-210ENST00000557431 LAD1O00515 517 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 HNRNPDLO14979 420 aaKnown RBP15.29■□□□□ 0.04
SLIRP-210ENST00000557431 CHADO15335 359 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 ATF6P18850 670 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 CTHP32929 405 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 ALDH1A3P47895 512 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 PXNP49023 591 aaPredicted RBP15.29■□□□□ 0.04
SLIRP-210ENST00000557431 GRIN1Q05586 938 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 FCHO2Q0JRZ9 810 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 PLD1Q13393 1074 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms