RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CLEC17AQ6ZS10 378 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 GJD3Q8N144 294 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 CCDC127Q96BQ5 260 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 NR2E1Q9Y466 385 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 TIMM13Q9Y5L4 95 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-209ENST00000557342 WDR27A2RRH5 827 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 RFPL2O75678 378 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 ABLIM3O94929 683 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 C8AP07357 584 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 CPB1P15086 417 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 ATF2P15336 505 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 NR2F2P24468 414 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 PRCPP42785 496 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 ARPP19P56211 112 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 BFSP1Q12934 665 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 STIM1Q13586 685 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 EDRF1Q3B7T1 1238 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 CEP135Q66GS9 1140 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 LMBRD2Q68DH5 695 aaPredicted RBP13.45□□□□□ -0.26
SLIRP-209ENST00000557342 TRAPPC11Q7Z392 1133 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 THEM5Q8N1Q8 247 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 OR5B17Q8NGF7 314 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 SMG7Q92540 1137 aaKnown RBP13.45□□□□□ -0.26
SLIRP-209ENST00000557342 BORCS6Q96GS4 357 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 GBP4Q96PP9 640 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 TSG101Q99816 390 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 PRKD2Q9BZL6 878 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 POMKQ9H5K3 350 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 PIDD1Q9HB75 910 aa13.45□□□□□ -0.26
SLIRP-209ENST00000557342 PTPRJQ12913 1337 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 HUS1O60921 280 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 XYLBO75191 536 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 POU2F2P09086 479 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 WEE2P0C1S8 567 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 ADAM9Q13443 819 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 SMYD4Q8IYR2 804 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-209ENST00000557342 TMEM86AQ8N2M4 240 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-209ENST00000557342 CXorf38Q8TB03 319 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 SLC7A14Q8TBB6 771 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 SPATA18Q8TC71 538 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 TMC2Q8TDI7 906 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 PARD3BQ8TEW8 1205 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 ERCC4Q92889 916 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-209ENST00000557342 HPDLQ96IR7 371 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 GDAP2Q9NXN4 497 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 AFF4Q9UHB7 1163 aaKnown RBP13.44□□□□□ -0.26
SLIRP-209ENST00000557342 SIX4Q9UIU6 781 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 MAN1B1Q9UKM7 699 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 USTQ9Y2C2 406 aa13.44□□□□□ -0.26
SLIRP-209ENST00000557342 LOC730098B7Z3J9 87 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 PRRG1O14668 218 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 PSMA7O14818 248 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 CETN3O15182 167 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 PHACTR2O75167 634 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 LRG1P02750 347 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 KRT13P13646 458 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 PSMC2P35998 433 aaKnown RBP13.43□□□□□ -0.26
SLIRP-209ENST00000557342 CASP4P49662 377 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 CLDN10P78369 228 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 ENPEPQ07075 957 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 GPR17Q13304 367 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 TRPC3Q13507 836 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 ZCWPW2Q504Y3 356 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 WSCD1Q658N2 575 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 CENPPQ6IPU0 288 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 INTS8Q75QN2 995 aaKnown RBP13.43□□□□□ -0.26
SLIRP-209ENST00000557342 DPH6Q7L8W6 267 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 TCEAL8Q8IYN2 117 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 ADSSL1Q8N142 457 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 TOP6BLQ8N6T0 577 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 ZNF707Q96C28 371 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-209ENST00000557342 DHTKD1Q96HY7 919 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-209ENST00000557342 RPGRIP1Q96KN7 1286 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 MKNK1Q9BUB5 465 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 CYP4F11Q9HBI6 524 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 WDR6Q9NNW5 1121 aaKnown RBP13.43□□□□□ -0.26
SLIRP-209ENST00000557342 CDH22Q9UJ99 828 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 SNX9Q9Y5X1 595 aa13.43□□□□□ -0.26
SLIRP-209ENST00000557342 DOCK6Q96HP0 2047 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 LRRIQ3A6PVS8 624 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-209ENST00000557342 IKBKBO14920 756 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 ATICP31939 592 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 VAMP7P51809 220 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 MYL7Q01449 175 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 LRRC63Q05C16 580 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 ADCY1Q08828 1119 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 SMARCB1Q12824 385 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 BIRC3Q13489 604 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 RNF19BQ6ZMZ0 732 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 OTOP3Q7RTS5 596 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 FAM186BQ8IYM0 893 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 TRIML1Q8N9V2 468 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 TDRD5Q8NAT2 981 aaKnown RBP13.42□□□□□ -0.26
SLIRP-209ENST00000557342 ZNF516Q92618 1163 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 SYAP1Q96A49 352 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-209ENST00000557342 ACSF2Q96CM8 615 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-209ENST00000557342 FAM84AQ96KN4 292 aa13.42□□□□□ -0.26
SLIRP-209ENST00000557342 GZF1Q9H116 711 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms