RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SYT12Q8IV01 421 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 PPM1NQ8N819 430 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 FBXO18Q8NFZ0 1043 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 MDM1Q8TC05 714 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 SLC25A43Q8WUT9 341 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-246ENST00000557030 CLIP3Q96DZ5 547 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 CDC5LQ99459 802 aaKnown RBP5.54□□□□□ -1.52
ATXN3-246ENST00000557030 THUMPD2Q9BTF0 503 aaKnown RBP5.54□□□□□ -1.52
ATXN3-246ENST00000557030 HOMER2Q9NSB8 354 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 DKK2Q9UBU2 259 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 ZBTB21Q9ULJ3 1066 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 CHST2Q9Y4C5 530 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 PCDHGA2Q9Y5H1 932 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 USP6P35125 1406 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 CEP170BQ9Y4F5 1589 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-246ENST00000557030 NALCNQ8IZF0 1738 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 STRCP1A6NGW2 1772 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 WNT10BO00744 389 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 ADCY6O43306 1168 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 FAM20BO75063 409 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 PDGFRBP09619 1106 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 MTNR1BP49286 362 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 SLC5A3P53794 718 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 PPP3CAQ08209 521 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 EIF4A2Q14240 407 aaKnown RBP5.53□□□□□ -1.52
ATXN3-246ENST00000557030 ACAP2Q15057 778 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 ZSCAN23Q3MJ62 389 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 BRDTQ58F21 947 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-246ENST00000557030 TTC22Q5TAA0 569 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 SYDE2Q5VT97 1194 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 METRNLQ641Q3 311 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 ANKS6Q68DC2 871 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 Q6ZVL8 140 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 XYLT1Q86Y38 959 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 RPAP2Q8IXW5 612 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-246ENST00000557030 CBARPQ8N350 705 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-246ENST00000557030 ZNF276Q8N554 614 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 TSPYL6Q8N831 410 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 NEU4Q8WWR8 484 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-246ENST00000557030 FATE1Q969F0 183 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 SYAP1Q96A49 352 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-246ENST00000557030 CEP95Q96GE4 821 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 PDLIM2Q96JY6 352 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 NDC1Q9BTX1 674 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 TYW1Q9NV66 732 aaKnown RBP5.53□□□□□ -1.52
ATXN3-246ENST00000557030 MKS1Q9NXB0 559 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 NOL7Q9UMY1 257 aaKnown RBP5.53□□□□□ -1.52
ATXN3-246ENST00000557030 FZD1Q9UP38 647 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 DNM3Q9UQ16 869 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 GPR45Q9Y5Y3 372 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 RGPD1P0DJD0 1748 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 XRN1Q8IZH2 1706 aaKnown RBP5.53□□□□□ -1.52
ATXN3-246ENST00000557030 ATRNL1Q5VV63 1379 aa5.53□□□□□ -1.52
ATXN3-246ENST00000557030 DIP2AQ14689 1571 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 TBKBP1A7MCY6 615 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 B5MCH6 92 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 ALG1L2C9J202 215 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 XPOTO43592 962 aaKnown RBP5.52□□□□□ -1.53
ATXN3-246ENST00000557030 PHF2O75151 1096 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 HMMRO75330 724 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 PTGS2P35354 604 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 TGFB2P61812 414 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 NOMO1Q15155 1222 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 BMT2Q1RMZ1 405 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 PLEKHG6Q3KR16 790 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 MUM1L1Q5H9M0 696 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 MFSD14BQ5SR56 506 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 PRAMEF14Q5SWL7 426 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 MBNL2Q5VZF2 373 aaKnown RBP5.52□□□□□ -1.53
ATXN3-246ENST00000557030 ANKRD44Q8N8A2 993 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 C1orf162Q8NEQ5 155 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-246ENST00000557030 REPS2Q8NFH8 660 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 GPR156Q8NFN8 814 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 ZNF480Q8WV37 535 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 HAS1Q92839 578 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 CHFRQ96EP1 664 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 UHRF1Q96T88 793 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-246ENST00000557030 PRRX2Q99811 253 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 MENTQ9BUN1 341 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 ADI1Q9BV57 179 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 IKZF4Q9H2S9 585 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 SLITRK6Q9H5Y7 841 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 DCTPP1Q9H773 170 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 LMBRD1Q9NUN5 540 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 SORCS3Q9UPU3 1222 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 CLCA2Q9UQC9 943 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 EID1Q9Y6B2 187 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 ZNF142P52746 1687 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-246ENST00000557030 DLG5Q8TDM6 1919 aa5.52□□□□□ -1.53
ATXN3-246ENST00000557030 LEFTY2O00292 366 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 DYNC1I1O14576 645 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 GABRDO14764 452 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 EPB41L2O43491 1005 aaKnown RBP5.51□□□□□ -1.53
ATXN3-246ENST00000557030 ADH4P08319 380 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 AGXTP21549 392 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 MCCP23508 829 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 PTPN7P35236 360 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 PER3P56645 1201 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 MALLQ13021 153 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 TWISTNBQ3B726 338 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms