RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 EXTL3O43909 919 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 HIP1RO75146 1068 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 OAZ2O95190 189 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 MUTP22033 750 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 PMLP29590 882 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 HOXA6P31267 233 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 EPHB3P54753 998 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 SPAG1Q07617 926 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 TNK2Q07912 1038 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 PLD1Q13393 1074 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 CCINQ13939 588 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 SAFBQ15424 915 aaKnown RBP eCLIP9.85□□□□□ -0.832e-10■□□□□ 9.6
HNRNPC-227ENST00000556897 SLC10A6Q3KNW5 377 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 C12orf50Q8NA57 414 aaPredicted RBP9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 ZBTB45Q96K62 511 aaPredicted RBP9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 MKNK1Q9BUB5 465 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 ARRDC1-AS1Q9H2J1 176 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 KMT5AQ9NQR1 393 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 RXFP3Q9NSD7 469 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 DDX19AQ9NUU7 478 aaKnown RBP9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 SLC27A5Q9Y2P5 690 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 ATRXP46100 2492 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 E9PMD0 336 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 M0QZQ0 153 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 DPYSL4O14531 572 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 TM4SF5O14894 197 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 SLC16A4O15374 487 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 SOAT2O75908 522 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 ALDH1A3P47895 512 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 PXNP49023 591 aaPredicted RBP9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 FXR2P51116 673 aaKnown RBP eCLIP9.84□□□□□ -0.834e-14■■■■□ 21.2
HNRNPC-227ENST00000556897 LIMK1P53667 647 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 MAPK7Q13164 816 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 ARHGAP29Q52LW3 1261 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 TTC38Q5R3I4 469 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 GAREM2Q75VX8 874 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 HAUS6Q7Z4H7 955 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 DNAJB7Q7Z6W7 309 aaPredicted RBP9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 USP37Q86T82 979 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 WDR5BQ86VZ2 330 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 TTC9BQ8N6N2 239 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 ATAD1Q8NBU5 361 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 DRC1Q96MC2 740 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 RUSC1Q9BVN2 902 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 ATXN3LQ9H3M9 355 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 LRWD1Q9UFC0 647 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 RBM19Q9Y4C8 960 aaKnown RBP9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 GREB1Q4ZG55 1949 aa9.84□□□□□ -0.83
HNRNPC-227ENST00000556897 ATG2BQ96BY7 2078 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 OR6C75A6NL08 312 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 SFI1A8K8P3 1242 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 TOM1L1O75674 476 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 RPP40O75818 363 aaKnown RBP9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 PRAMEF12O95522 483 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 ZNF806P0C7X5 589 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 CXCL8P10145 99 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 GABRR2P28476 465 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 SHC2P98077 582 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 ST3GAL1Q11201 340 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 STRN3Q13033 797 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 GPR17Q13304 367 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 ORC2Q13416 577 aaPredicted RBP9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 NOLC1Q14978 699 aaKnown RBP eCLIP9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 GPR158Q5T848 1215 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 STPG1Q5TH74 334 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 CENPPQ6IPU0 288 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 PKN3Q6P5Z2 889 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 CACNA2D4Q7Z3S7 1137 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 KBTBD6Q86V97 674 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 SYNPOQ8N3V7 929 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 PIP4P2Q8N4L2 257 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 SNX29Q8TEQ0 813 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 GAB3Q8WWW8 586 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 PSMG2Q969U7 264 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 FAM212AQ96EL1 285 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 LOXL4Q96JB6 756 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 OXCT2Q9BYC2 517 aaPredicted RBP9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 SMG9Q9H0W8 520 aaKnown RBP9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 SMOC1Q9H4F8 434 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 DNM3Q9UQ16 869 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 FRYQ5TBA9 3013 aa9.83□□□□□ -0.84
HNRNPC-227ENST00000556897 MTMR11A4FU01 709 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 PP2D1A8MPX8 630 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 CLDN3O15551 220 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 EPN2O95208 641 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 CCDC192P0DO97 292 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 LRPAP1P30533 357 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 RAP1GAPP47736 663 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 AARSP49588 968 aaKnown RBP eCLIP9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 GUCY2FP51841 1108 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 CDR1P51861 262 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 ANAPC15P60006 121 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 CYP4F8P98187 520 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 RAD51AP2Q09MP3 1159 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 ITPRIPL2Q3MIP1 535 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 ARHGAP15Q53QZ3 475 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 OVOS1Q6IE37 1185 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 RINT1Q6NUQ1 792 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 DSTYKQ6XUX3 929 aa9.82□□□□□ -0.84
HNRNPC-227ENST00000556897 C1orf186Q6ZWK4 172 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms