RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OLFML3Q9NRN5 406 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 PANK4Q9NVE7 773 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 FAM13BQ9NYF5 915 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 EPS15L1Q9UBC2 864 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 DERAQ9Y315 318 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 PLXNA4Q9HCM2 1894 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 WDR81Q562E7 1941 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 MYMKA6NI61 221 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ACTN4O43707 911 aaKnown RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 CUTAO60888 179 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ODC1P11926 461 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 PTPN2P17706 415 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 LRPAP1P30533 357 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 TNFSF9P41273 254 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ACOT2P49753 483 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 SPAG1Q07617 926 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 FOXD4L6Q3SYB3 417 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 PABPC1LQ4VXU2 614 aaKnown RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 CYP4A22Q5TCH4 519 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 SPATA1Q5VX52 437 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 FOXD4L3Q6VB84 417 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 RNF19BQ6ZMZ0 732 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 MTSS1LQ765P7 747 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 METTL23Q86XA0 190 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 NT5DC4Q86YG4 428 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 CACTINQ8WUQ7 758 aaKnown RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ASIC4Q96FT7 647 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ZNF512Q96ME7 567 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 TNMDQ9H2S6 317 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 TBC1D7Q9P0N9 293 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 MAP10Q9P2G4 905 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 TUBGCP4Q9UGJ1 667 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 CPSF3Q9UKF6 684 aaKnown RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 DSEQ9UL01 958 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 KCNH3Q9ULD8 1083 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 MRPS23Q9Y3D9 190 aaKnown RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 C2CD2Q9Y426 696 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 OR6C75A6NL08 312 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 ZNF197O14709 1029 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 ADAM12O43184 909 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 ABLIM3O94929 683 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 IL18RAPO95256 599 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 PAPLNO95428 1278 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 POU2F2P09086 479 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 AVPR2P30518 371 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 LILRA4P59901 499 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 ROR1Q01973 937 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 ZBTB6Q15916 424 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 L1TD1Q5T7N2 865 aaKnown RBP7.93□□□□□ -1.14
SCFD1-222ENST00000556768 JADE1Q6IE81 842 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 TCEAL8Q8IYN2 117 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 THEM5Q8N1Q8 247 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 PLPP7Q8NBV4 271 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 C1orf216Q8TAB5 229 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 LRRC15Q8TF66 581 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 NOC3LQ8WTT2 800 aaKnown RBP7.93□□□□□ -1.14
SCFD1-222ENST00000556768 USB1Q9BQ65 265 aaKnown RBP7.93□□□□□ -1.14
SCFD1-222ENST00000556768 HAPLN2Q9GZV7 340 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 MAGEF1Q9HAY2 307 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 FBXL5Q9UKA1 691 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 CDH7Q9ULB5 785 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 DUSP12Q9UNI6 340 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 ATP6V1DQ9Y5K8 247 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 STYXL1Q9Y6J8 313 aa7.93□□□□□ -1.14
SCFD1-222ENST00000556768 ANKRD63C9JTQ0 380 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 M0QZQ0 153 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 KIAA0391O15091 583 aaKnown RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 RNF40O75150 1001 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 OAZ2O95190 189 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 F13A1P00488 732 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 ADRB2P07550 413 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 GARTP22102 1010 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 PNPLA4P41247 253 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 ALDH1A3P47895 512 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 CLCN5P51795 746 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 PTPN5P54829 565 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 ADCY1Q08828 1119 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 PLD1Q13393 1074 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 MRPL58Q14197 206 aaKnown RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 OVOS1Q6IE37 1185 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 BLOC1S3Q6QNY0 202 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 CD300LGQ6UXG3 332 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 RSPO2Q6UXX9 243 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 PDZD4Q76G19 769 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 LAPTM4BQ86VI4 370 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 CEP57L1Q8IYX8 460 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 SLC44A3Q8N4M1 653 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 LEMD2Q8NC56 503 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 FLCNQ8NFG4 579 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 ZNF592Q92610 1267 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 FGF13Q92913 245 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 DHX58Q96C10 678 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 DNAJC19Q96DA6 116 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 SHDQ96IW2 340 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 MYADMQ96S97 322 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 FIZ1Q96SL8 496 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 FAM213AQ9BRX8 229 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 DPP3Q9NY33 737 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 GDE1Q9NZC3 331 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 WNT16Q9UBV4 365 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms