RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 KCNE1P15382 129 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 CREB5Q02930 508 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 PTPAQ15257 358 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 XKR4Q5GH76 650 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 DAB2IPQ5VWQ8 1189 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 BPIFB1Q8TDL5 484 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 TNFRSF25Q93038 417 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 HHIPQ96QV1 700 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 ACO2Q99798 780 aaKnown RBP15.21■□□□□ 0.03
ACTN1-219ENST00000556432 POLR3CQ9BUI4 534 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-219ENST00000556432 DNAJC25Q9H1X3 360 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 CNTN3Q9P232 1028 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 PHLPP2Q6ZVD8 1323 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 CCDC163A0A0D9SF12 145 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 AKAP3O75969 853 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 FGF19O95750 216 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 CAVIN2O95810 425 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 GABRR2P28476 465 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 PLK5Q496M5 336 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 SH3PXD2AQ5TCZ1 1133 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 KDF1Q8NAX2 398 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-219ENST00000556432 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 TARS2Q9BW92 718 aaKnown RBP15.2■□□□□ 0.02
ACTN1-219ENST00000556432 LRRC3Q9BY71 257 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 ADAM33Q9BZ11 813 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 TMEM60Q9H2L4 133 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 OBP2AQ9NY56 170 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 TUBGCP4Q9UGJ1 667 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 TPCN1Q9ULQ1 816 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 SLC27A5Q9Y2P5 690 aa15.2■□□□□ 0.02
ACTN1-219ENST00000556432 PKD1L2Q7Z442 2459 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 SPEGQ15772 3267 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 TMEM8BA6NDV4 472 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 BTBD18B2RXH4 712 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 SOAT2O75908 522 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 RHOBTB1O94844 696 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 PRAMEF12O95522 483 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 MCF2P10911 925 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 RPA1P27694 616 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 GBP1P32455 592 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 MCM2P49736 904 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 PEX3P56589 373 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 TRIM29Q14134 588 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 MPZL3Q6UWV2 235 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 GAREM2Q75VX8 874 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 CENPQQ7L2Z9 268 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-219ENST00000556432 ITIH5Q86UX2 942 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 DIS3L2Q8IYB7 885 aaKnown RBP15.19■□□□□ 0.02
ACTN1-219ENST00000556432 BEST2Q8NFU1 509 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 ZC3H10Q96K80 434 aaKnown RBP15.19■□□□□ 0.02
ACTN1-219ENST00000556432 SMG9Q9H0W8 520 aaKnown RBP15.19■□□□□ 0.02
ACTN1-219ENST00000556432 BHMT2Q9H2M3 363 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 CRISPLD1Q9H336 500 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 POLR3BQ9NW08 1133 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-219ENST00000556432 ANKFY1Q9P2R3 1169 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 ASB3Q9Y575 518 aa15.19■□□□□ 0.02
ACTN1-219ENST00000556432 LAMA1P25391 3075 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 OR6C75A6NL08 312 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 DCLK1O15075 740 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 PFKFB2O60825 505 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 RNF40O75150 1001 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 VNN2O95498 520 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 CCT6AP40227 531 aaKnown RBP15.18■□□□□ 0.02
ACTN1-219ENST00000556432 NPTX2P47972 431 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 CYP4F8P98187 520 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 CACNB1Q02641 598 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-219ENST00000556432 DMP1Q13316 513 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-219ENST00000556432 TAF12Q16514 161 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 HAUS3Q68CZ6 603 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 FSTL4Q6MZW2 842 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 DSTYKQ6XUX3 929 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 DNAJB7Q7Z6W7 309 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-219ENST00000556432 CAMKK1Q8N5S9 505 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 ATAD1Q8NBU5 361 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 ZCCHC14Q8WYQ9 949 aaKnown RBP15.18■□□□□ 0.02
ACTN1-219ENST00000556432 MKNK1Q9BUB5 465 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 OXCT2Q9BYC2 517 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-219ENST00000556432 TM6SF1Q9BZW5 370 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 TASP1Q9H6P5 420 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 PTPRHQ9HD43 1115 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 KMT5AQ9NQR1 393 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 GKN1Q9NS71 199 aa15.18■□□□□ 0.02
ACTN1-219ENST00000556432 KIF26AQ9ULI4 1882 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-219ENST00000556432 OAZ2O95190 189 aa15.17■□□□□ 0.02
ACTN1-219ENST00000556432 CTDNEP1O95476 244 aa15.17■□□□□ 0.02
ACTN1-219ENST00000556432 TOP3BO95985 862 aaKnown RBP15.17■□□□□ 0.02
ACTN1-219ENST00000556432 MATR3P43243 847 aaKnown RBP eCLIP15.17■□□□□ 0.02
ACTN1-219ENST00000556432 GPR17Q13304 367 aa15.17■□□□□ 0.02
ACTN1-219ENST00000556432 VEPH1Q14D04 833 aa15.17■□□□□ 0.02
ACTN1-219ENST00000556432 KARSQ15046 597 aaKnown RBP15.17■□□□□ 0.02
ACTN1-219ENST00000556432 SEZ6Q53EL9 994 aa15.17■□□□□ 0.02
ACTN1-219ENST00000556432 TMEM196Q5HYL7 178 aa15.17■□□□□ 0.02
ACTN1-219ENST00000556432 TTC9BQ8N6N2 239 aa15.17■□□□□ 0.02
ACTN1-219ENST00000556432 PSMG2Q969U7 264 aa15.17■□□□□ 0.02
ACTN1-219ENST00000556432 SEPT5Q99719 369 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-219ENST00000556432 DUSP15Q9H1R2 295 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-219ENST00000556432 ASPMQ8IZT6 3477 aa15.17■□□□□ 0.02
ACTN1-219ENST00000556432 CITO14578 2027 aa15.17■□□□□ 0.02
ACTN1-219ENST00000556432 ATG2BQ96BY7 2078 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 LNP1A1A4G5 178 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms