RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SYCE2Q6PIF2 218 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 BLOC1S3Q6QNY0 202 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 PRSS55Q6UWB4 352 aaPredicted RBP10.43□□□□□ -0.74
SRP54-210ENST00000556380 ZC3H3Q8IXZ2 948 aaKnown RBP10.43□□□□□ -0.74
SRP54-210ENST00000556380 PARD3BQ8TEW8 1205 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 GBP4Q96PP9 640 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 ASB2Q96Q27 587 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 POP1Q99575 1024 aaKnown RBP10.43□□□□□ -0.74
SRP54-210ENST00000556380 EMILIN2Q9BXX0 1053 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 S1PR5Q9H228 398 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 CLSTN2Q9H4D0 955 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 MTRRQ9UBK8 725 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 BARX2Q9UMQ3 279 aaPredicted RBP10.43□□□□□ -0.74
SRP54-210ENST00000556380 BACE2Q9Y5Z0 518 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 HCFC2Q9Y5Z7 792 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 ANK1P16157 1881 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 MAPK13O15264 365 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 CALUO43852 315 aaPredicted RBP10.42□□□□□ -0.74
SRP54-210ENST00000556380 AKAP3O75969 853 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 OAZ2O95190 189 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 PAPLNO95428 1278 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 ADH1AP07327 375 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 EPCAMP16422 314 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 RPL17P18621 184 aaKnown RBP10.42□□□□□ -0.74
SRP54-210ENST00000556380 KLRC2P26717 231 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 NDUFV1P49821 464 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 PMS1P54277 932 aaKnown RBP10.42□□□□□ -0.74
SRP54-210ENST00000556380 RAB33AQ14088 237 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 PSMD5Q16401 504 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 CAMK4Q16566 473 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 DUOXA2Q1HG44 320 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 EDRF1Q3B7T1 1238 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 LMBRD2Q68DH5 695 aaPredicted RBP10.42□□□□□ -0.74
SRP54-210ENST00000556380 ISM2Q6H9L7 571 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 ANKRD54Q6NXT1 300 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 LLGL2Q6P1M3 1020 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 PDXDC1Q6P996 788 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 Q6ZNB5 142 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 PPFIBP1Q86W92 1011 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 CEP57Q86XR8 500 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 WDR49Q8IV35 697 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 GPT2Q8TD30 523 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 NOC3LQ8WTT2 800 aaKnown RBP10.42□□□□□ -0.74
SRP54-210ENST00000556380 CACTINQ8WUQ7 758 aaKnown RBP10.42□□□□□ -0.74
SRP54-210ENST00000556380 SENP8Q96LD8 212 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 MTMR12Q9C0I1 747 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 NUB1Q9Y5A7 615 aa10.42□□□□□ -0.74
SRP54-210ENST00000556380 VWA8A3KMH1 1905 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 CYP11A1P05108 521 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 HOXB8P17481 243 aaPredicted RBP10.41□□□□□ -0.74
SRP54-210ENST00000556380 TYMPP19971 482 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 NR2F2P24468 414 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 POLR2BP30876 1174 aaKnown RBP10.41□□□□□ -0.74
SRP54-210ENST00000556380 MCM4P33991 863 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 KCNQ1P51787 676 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 RBP5P82980 135 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 CREMQ03060 361 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 ENPEPQ07075 957 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 ADAM9Q13443 819 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 AAK1Q2M2I8 961 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 ANKRD40Q6AI12 368 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 SLC8B1Q6J4K2 584 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 FOXR2Q6PJQ5 311 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 ANKS3Q6ZW76 656 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 TRAPPC11Q7Z392 1133 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 LIMS2Q7Z4I7 341 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 CSGALNACT2Q8N6G5 542 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 LRRC52Q8N7C0 313 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 SMRP1Q8NCR6 262 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 APPL2Q8NEU8 664 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 FEZF2Q8TBJ5 459 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 HDAC7Q8WUI4 952 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 SUSD6Q92537 303 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 CASP10Q92851 521 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 CCDC127Q96BQ5 260 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 DHTKD1Q96HY7 919 aaPredicted RBP10.41□□□□□ -0.74
SRP54-210ENST00000556380 CGRRF1Q99675 332 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 CD207Q9UJ71 328 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 ITGA11Q9UKX5 1188 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 AGAP1Q9UPQ3 857 aa10.41□□□□□ -0.74
SRP54-210ENST00000556380 C5orf42Q9H799 3197 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 SCN1AP35498 2009 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 LRRIQ3A6PVS8 624 aaPredicted RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 KPNA7A9QM74 516 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 BIN1O00499 593 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 MBTPS2O43462 519 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 TGM5O43548 720 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 ABLIM3O94929 683 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 CST3P01034 146 aaPredicted RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 C4BPAP04003 597 aaKnown RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 ITGB3P05106 788 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 CFHP08603 1231 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 DLATP10515 647 aaKnown RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 FECHP22830 423 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 CCNE1P24864 410 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 RPL13P26373 211 aaKnown RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 OR1D2P34982 312 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 CA8P35219 290 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 GGCXP38435 758 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 PNPLA4P41247 253 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms