RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TMTC1Q8IUR5 882 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 FAM114A1Q8IWE2 563 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 GPC2Q8N158 579 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 LCORLQ8N3X6 602 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 FAM26EQ8N5C1 309 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 VGLL2Q8N8G2 317 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 IQUBQ8NA54 791 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 FANCBQ8NB91 859 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 NOC3LQ8WTT2 800 aaKnown RBP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 DPF2Q92785 391 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF622Q969S3 477 aaKnown RBP eCLIP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 MBD6Q96DN6 1003 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 NUP88Q99567 741 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 NAPGQ99747 312 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 CSRNP2Q9H175 543 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 TMX1Q9H3N1 280 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 SLC6A20Q9NP91 592 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 ZNHIT6Q9NWK9 470 aaKnown RBP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 MYO1AQ9UBC5 1043 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 ABCF2Q9UG63 623 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 TMEFF2Q9UIK5 374 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 KCNJ14Q9UNX9 436 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 TSC22D4Q9Y3Q8 395 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 COL6A3P12111 3177 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 NAV1Q8NEY1 1877 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 A0A0U1RQG5 324 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CTAGE15A4D2H0 777 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CCDC151A5D8V7 595 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 VWA3AA6NCI4 1184 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 MATN3O15232 486 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 PRPF3O43395 683 aaKnown RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 MFAP3LO75121 409 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 LRG1P02750 347 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CYP1A1P04798 512 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CTAGE8P0CG41 777 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CYP19A1P11511 503 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF18P17022 549 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 FGFR2P21802 821 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 OAS2P29728 719 aaKnown RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 ECI1P42126 302 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 STAT6P42226 847 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 GNAQP50148 359 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 ADKP55263 362 aaKnown RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 PPP2CBP62714 309 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 PPP2CAP67775 309 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 TBX2Q13207 712 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 NTRK3Q16288 839 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 PKN2Q16513 984 aaKnown RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 HSP90AA4PQ58FG1 418 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CCDC178Q5BJE1 867 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 SPECC1Q5M775 1068 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF569Q5MCW4 686 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 PRAMEF18Q5VWM3 479 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 RRAGBQ5VZM2 374 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CYP26C1Q6V0L0 522 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 TOGARAM2Q6ZUX3 1019 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 SRGAP1Q7Z6B7 1085 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 KIAA1328Q86T90 577 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CTAGE6Q86UF2 777 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 ANKRD18AQ8IVF6 992 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 REXO1L1PQ8IX06 675 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CTAGE4Q8IX94 777 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 MIGA1Q8NAN2 632 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CAGE1Q8TC20 777 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF669Q96BR6 464 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 LOXL4Q96JB6 756 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 BRIP1Q9BX63 1249 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CRNKL1Q9BZJ0 848 aaKnown RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CDIP1Q9H305 208 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 MAGEF1Q9HAY2 307 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 BARX1Q9HBU1 254 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CABP5Q9NP86 173 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 LZTFL1Q9NQ48 299 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 VPS54Q9P1Q0 977 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 MYOTQ9UBF9 498 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 ARPP21Q9UBL0 812 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-241ENST00000556374 ASH2LQ9UBL3 628 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 FTSJ1Q9UET6 329 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 RWDD2AQ9UIY3 292 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 ANAPC4Q9UJX5 808 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 DENND2AQ9ULE3 1009 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 ZBTB1Q9Y2K1 713 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 PCDHB6Q9Y5E3 794 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 PCDHA2Q9Y5H9 948 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 SNED1Q8TER0 1413 aa4.87□□□□□ -1.63
ATXN3-241ENST00000556374 CCDC194A0A1B0GVG4 234 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 BICDL2A1A5D9 508 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 TSPY2A6NKD2 308 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 GSG1L2A8MUP6 293 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 KCNJ18B7U540 433 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 FZD9O00144 591 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 PSMA7O14818 248 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 POLR3GO15318 223 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-241ENST00000556374 B4GALT3O60512 393 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 MYL1P05976 194 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 IVLP07476 585 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 SCG2P13521 617 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 CYLC1P35663 651 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-241ENST00000556374 LONP1P36776 959 aaKnown RBP4.86□□□□□ -1.63
ATXN3-241ENST00000556374 CCT6AP40227 531 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms