RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 MYO15AQ9UKN7 3530 aa13.81□□□□□ -0.2
APEX1-213ENST00000556296 PDCD11Q14690 1871 aaKnown RBP13.8□□□□□ -0.2
APEX1-213ENST00000556296 PRRG1O14668 218 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 PIGRP01833 764 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 PTPN2P17706 415 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 NLRP12P59046 1061 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 NTHL1P78549 312 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 UBXN2BQ14CS0 331 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 KNOP1Q1ED39 458 aaKnown RBP13.8□□□□□ -0.2
APEX1-213ENST00000556296 ZNF528Q3MIS6 628 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 ZBTB41Q5SVQ8 909 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 SMYD4Q8IYR2 804 aaPredicted RBP13.8□□□□□ -0.2
APEX1-213ENST00000556296 ELMOD1Q8N336 334 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 MLKLQ8NB16 471 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 ATRIPQ8WXE1 791 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 RUBCNQ92622 972 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 TCHPQ9BT92 498 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 TARS2Q9BW92 718 aaKnown RBP13.8□□□□□ -0.2
APEX1-213ENST00000556296 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 FBXO4Q9UKT5 387 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 NUB1Q9Y5A7 615 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.8□□□□□ -0.2
APEX1-213ENST00000556296 CDY1Q9Y6F8 540 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 R4GN57 208 aa13.8□□□□□ -0.2
APEX1-213ENST00000556296 FAM170BA6NMN3 283 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 PSMA7O14818 248 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 SYN3O14994 580 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 ECI2O75521 394 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 TOM1L1O75674 476 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 BMP6P22004 513 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 RPL9P32969 192 aaKnown RBP13.79□□□□□ -0.2
APEX1-213ENST00000556296 GRM5P41594 1212 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 PRCPP42785 496 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 CLCNKBP51801 687 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 SNRPFP62306 86 aaKnown RBP13.79□□□□□ -0.2
APEX1-213ENST00000556296 KCNA1Q09470 495 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 PPP2R5DQ14738 602 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 UPP1Q16831 310 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 ZNF568Q3ZCX4 644 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 GLRA4Q5JXX5 417 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 SLFN12LQ6IEE8 588 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 ZNF852Q6ZMS4 543 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 HS2ST1Q7LGA3 356 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 NELFCDQ8IXH7 590 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 GPR161Q8N6U8 529 aaKnown RBP13.79□□□□□ -0.2
APEX1-213ENST00000556296 ZNF461Q8TAF7 563 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 ITFG1Q8TB96 612 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 GOLGA5Q8TBA6 731 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 ACAP3Q96P50 834 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 PPP1R10Q96QC0 940 aaKnown RBP13.79□□□□□ -0.2
APEX1-213ENST00000556296 ACO2Q99798 780 aaKnown RBP13.79□□□□□ -0.2
APEX1-213ENST00000556296 FOXQ1Q9C009 403 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 ANO10Q9NW15 660 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 DLGAP2Q9P1A6 1054 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 MAFFQ9ULX9 164 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 NOTCH4Q99466 2003 aa13.79□□□□□ -0.2
APEX1-213ENST00000556296 SMIM28A0A1B0GU29 152 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 SYCE3A1L190 88 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 MAN2B1O00754 1011 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 SPTLC1O15269 473 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 SDHBP21912 280 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 HOXD13P35453 343 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 STX1AQ16623 288 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 XKR4Q5GH76 650 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 CYP4A22Q5TCH4 519 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 IQCEQ6IPM2 695 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 MPZL3Q6UWV2 235 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 NPAS3Q8IXF0 933 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 APPL2Q8NEU8 664 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 DHTKD1Q96HY7 919 aaPredicted RBP13.78□□□□□ -0.2
APEX1-213ENST00000556296 RPP25Q9BUL9 199 aaKnown RBP13.78□□□□□ -0.2
APEX1-213ENST00000556296 PTPRHQ9HD43 1115 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 AVENQ9NQS1 362 aaPredicted RBP13.78□□□□□ -0.2
APEX1-213ENST00000556296 CGNQ9P2M7 1197 aaKnown RBP13.78□□□□□ -0.2
APEX1-213ENST00000556296 ANKFY1Q9P2R3 1169 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 DNMT3BQ9UBC3 853 aaKnown RBP13.78□□□□□ -0.2
APEX1-213ENST00000556296 PCDHGA2Q9Y5H1 932 aa13.78□□□□□ -0.2
APEX1-213ENST00000556296 RIF1Q5UIP0 2472 aaKnown RBP13.78□□□□□ -0.2
APEX1-213ENST00000556296 ARHGEF37A1IGU5 675 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 PODXLO00592 558 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 PDXKO00764 312 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 ABLIM1O14639 778 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 CLDN3O15551 220 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 ADAM12O43184 909 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 CALUO43852 315 aaPredicted RBP13.77□□□□□ -0.21
APEX1-213ENST00000556296 MICAL2O94851 1124 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 RHOP08100 348 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 MCF2P10911 925 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 DMDP11532 3685 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 PROZP22891 400 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 TKTP29401 623 aaKnown RBP13.77□□□□□ -0.21
APEX1-213ENST00000556296 MATR3P43243 847 aaKnown RBP eCLIP13.77□□□□□ -0.21
APEX1-213ENST00000556296 PUM1Q14671 1186 aaKnown RBP eCLIP13.77□□□□□ -0.21
APEX1-213ENST00000556296 DPCR1Q3MIW9 517 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.21
APEX1-213ENST00000556296 TPGS2Q68CL5 300 aa13.77□□□□□ -0.21
APEX1-213ENST00000556296 SLC8B1Q6J4K2 584 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms