RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 RALGAPA2Q2PPJ7 1873 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 ARHGEF37A1IGU5 675 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 KPNA7A9QM74 516 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 NRP1O14786 923 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 PPEF2O14830 753 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 TRAPPC3O43617 180 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 B4GALT3O60512 393 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 B3GAT3O94766 335 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 FAM163BP0C2L3 166 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 LAG3P18627 525 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 CDC25BP30305 580 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 OR1G1P47890 313 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 BCAR1P56945 870 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 LILRA4P59901 499 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 GCNT1Q02742 428 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 WDR72Q3MJ13 1102 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 FIGNQ5HY92 759 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 ZNF667Q5HYK9 610 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 SPOUT1Q5T280 376 aaKnown RBP10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 SPECC1LQ69YQ0 1117 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 SCARA3Q6AZY7 606 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 ENOSF1Q7L5Y1 443 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 TMEM130Q8N3G9 435 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 CLP1Q92989 425 aaKnown RBP10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 PI4K2AQ9BTU6 479 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 FAM124BQ9H5Z6 455 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 APOBEC3GQ9HC16 384 aaKnown RBP10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 SIX2Q9NPC8 291 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 GDAP2Q9NXN4 497 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 DNAJB4Q9UDY4 337 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 PCDHA11Q9Y5I1 949 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 ANK1P16157 1881 aa10.78□□□□□ -0.68
MTHFD1-213ENST00000556284 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 LRRN2O75325 713 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 TADA2AO75478 443 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 NOL4O94818 638 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 CLSTN1O94985 981 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 UCHL3P15374 230 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 TRIM21P19474 475 aaKnown RBP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 TBXAS1P24557 533 aaPredicted RBP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 SLC11A1P49279 550 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 AARSP49588 968 aaKnown RBP eCLIP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 KLK7P49862 253 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 MFAP3P55082 362 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 TNNC1P63316 161 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 TRIM14Q14142 442 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 PHLDB3Q6NSJ2 640 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 KCNT2Q6UVM3 1135 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 CD300LGQ6UXG3 332 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 DPH6Q7L8W6 267 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 LIMS2Q7Z4I7 341 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 TDHQ8IZJ6 230 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 TTC39CQ8N584 583 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 JAKMIP2Q96AA8 810 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 KCTD12Q96CX2 325 aaKnown RBP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 ZNF558Q96NG5 402 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 PAAF1Q9BRP4 392 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 NIF3L1Q9GZT8 377 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 CYP3A43Q9HB55 503 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 UBE2TQ9NPD8 197 aaPredicted RBP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 FAM207AQ9NSI2 230 aaPredicted RBP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 CACNG4Q9UBN1 327 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 NXF1Q9UBU9 619 aaKnown RBP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 ADAM28Q9UKQ2 775 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 PRG3Q9Y2Y8 225 aaPredicted RBP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 RWDD3Q9Y3V2 267 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 NUB1Q9Y5A7 615 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 PCDHB12Q9Y5F1 795 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 MRPL42Q9Y6G3 142 aaKnown RBP10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 TRIP11Q15643 1979 aa10.77□□□□□ -0.69
MTHFD1-213ENST00000556284 CYB561D2O14569 222 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 SPTLC1O15269 473 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 KIF4AO95239 1232 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 TPM1P09493 284 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 PPM1AP35813 382 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 GCGRP47871 477 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 RABGGTBP53611 331 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 YWHAEP62258 255 aaKnown RBP10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 LRMPQ12912 555 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 ELAVL2Q12926 359 aaKnown RBP10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 CUL2Q13617 745 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 PTPN21Q16825 1174 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 SPOPLQ6IQ16 392 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 DSTYKQ6XUX3 929 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 PPFIBP1Q86W92 1011 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 DRC7Q8IY82 874 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 PPM1KQ8N3J5 372 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 TOP6BLQ8N6T0 577 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 COLGALT1Q8NBJ5 622 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 C3orf58Q8NDZ4 430 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 SPATA18Q8TC71 538 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 RABGGTAQ92696 567 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 IGSF21Q96ID5 467 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 SUSD3Q96L08 255 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 SENP8Q96LD8 212 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 PLVAPQ9BX97 442 aa10.76□□□□□ -0.69
MTHFD1-213ENST00000556284 NAA15Q9BXJ9 866 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms