RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 TSPY26PQ9H489 355 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 NSUN3Q9H649 340 aaKnown RBP15.2■□□□□ 0.02
SNX6-206ENST00000556162 VRTNQ9H8Y1 702 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNX6-206ENST00000556162 DSEQ9UL01 958 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 TIMM13Q9Y5L4 95 aaPredicted RBP15.2■□□□□ 0.02
SNX6-206ENST00000556162 C2orf71A6NGG8 1288 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 HIDE1A8MVS5 230 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 PMM2O15305 246 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 P4HA2O15460 535 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 LILRB3O75022 631 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 TNNC1P63316 161 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 MYL7Q01449 175 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 CREMQ03060 361 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 YWHAHQ04917 246 aaPredicted RBP15.2■□□□□ 0.02
SNX6-206ENST00000556162 IQCB1Q15051 598 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 ZNF667Q5HYK9 610 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 VARS2Q5ST30 1063 aaKnown RBP15.2■□□□□ 0.02
SNX6-206ENST00000556162 DPH6Q7L8W6 267 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 METTL23Q86XA0 190 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 LNX1Q8TBB1 728 aaPredicted RBP15.2■□□□□ 0.02
SNX6-206ENST00000556162 MMS19Q96T76 1030 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 EMILIN2Q9BXX0 1053 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 CBX8Q9HC52 389 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 NXF1Q9UBU9 619 aaKnown RBP15.2■□□□□ 0.02
SNX6-206ENST00000556162 COQ4Q9Y3A0 265 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 PCDHGC5Q9Y5F6 944 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 SCN1AP35498 2009 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 H7C4K7 107 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 ASS1P00966 412 aaKnown RBP15.19■□□□□ 0.02
SNX6-206ENST00000556162 CYP11A1P05108 521 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 TPM2P07951 284 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 P4HA1P13674 534 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 ZNF445P59923 1031 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 PSMD5Q16401 504 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 WDR44Q5JSH3 913 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 PRSS55Q6UWB4 352 aaPredicted RBP15.19■□□□□ 0.02
SNX6-206ENST00000556162 TOP6BLQ8N6T0 577 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 FAM200AQ8TCP9 573 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 PI4K2AQ9BTU6 479 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 TLE6Q9H808 572 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 RXFP1Q9HBX9 757 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 MYO7AQ13402 2215 aa15.19■□□□□ 0.02
SNX6-206ENST00000556162 PES1O00541 588 aaKnown RBP15.18■□□□□ 0.02
SNX6-206ENST00000556162 OAZ2O95190 189 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 TPM4P67936 248 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 MRPL58Q14197 206 aaKnown RBP15.18■□□□□ 0.02
SNX6-206ENST00000556162 VWA3BQ502W6 1294 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 WSCD1Q658N2 575 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 OVOS1Q6IE37 1185 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 RBM23Q86U06 439 aaKnown RBP15.18■□□□□ 0.02
SNX6-206ENST00000556162 TMEM86AQ8N2M4 240 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 MICALL1Q8N3F8 863 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 SEMA4DQ92854 862 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 NDST4Q9H3R1 872 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.18■□□□□ 0.022e-9■■■■■ 223.6
SNX6-206ENST00000556162 FNIP2Q9P278 1114 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 GOLGA6L19H0YKK7 550 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 CNPP09543 421 aaKnown RBP15.18■□□□□ 0.02
SNX6-206ENST00000556162 ZNF18P17022 549 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 CTXN3Q4LDR2 81 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 TCEAL5Q5H9L2 206 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 ZNF280DQ6N043 979 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 LUZP1Q86V48 1076 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 THEM5Q8N1Q8 247 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 PDCL2Q8N4E4 241 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 KLHL5Q96PQ7 755 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 OXCT2Q9BYC2 517 aaPredicted RBP15.18■□□□□ 0.02
SNX6-206ENST00000556162 HSD3B7Q9H2F3 369 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 L1RE1Q9UN81 338 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 BACE2Q9Y5Z0 518 aa15.18■□□□□ 0.02
SNX6-206ENST00000556162 COL4A4P53420 1690 aaPredicted RBP15.18■□□□□ 0.02
SNX6-206ENST00000556162 PER2O15055 1255 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 TEX28O15482 410 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 RPL17P18621 184 aaKnown RBP15.17■□□□□ 0.02
SNX6-206ENST00000556162 KLRC2P26717 231 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 NOP14P78316 857 aaKnown RBP15.17■□□□□ 0.02
SNX6-206ENST00000556162 KRT31Q15323 416 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 SOWAHAQ2M3V2 549 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 SPOPLQ6IQ16 392 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 ADGRD2Q7Z7M1 963 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 ELMO3Q96BJ8 720 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 ANP32EQ9BTT0 268 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 VPS16Q9H269 839 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 TAB2Q9NYJ8 693 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 MTRRQ9UBK8 725 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 LIMA1Q9UHB6 759 aaKnown RBP15.17■□□□□ 0.02
SNX6-206ENST00000556162 POLIQ9UNA4 740 aa15.17■□□□□ 0.02
SNX6-206ENST00000556162 PRRC2BQ5JSZ5 2229 aaKnown RBP15.17■□□□□ 0.02
SNX6-206ENST00000556162 LRRC10BA6NIK2 292 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 LRRN2O75325 713 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 ADH1AP07327 375 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 FAM163BP0C2L3 166 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 NRIP1P48552 1158 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 LHX1P48742 406 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 NDUFV1P49821 464 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 MIIPQ5JXC2 388 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 LIMS2Q7Z4I7 341 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 ADGRF2Q8IZF7 708 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 EHBP1Q8NDI1 1231 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms