RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 HK1P19367 917 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 GCSHP23434 173 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 HIBADHP31937 336 aaKnown RBP4.2□□□□□ -1.74
SRP54-209ENST00000555746 MAN2A2P49641 1150 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 ARFIP2P53365 341 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 PLP2Q04941 152 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 R3HDM1Q15032 1099 aaKnown RBP4.2□□□□□ -1.74
SRP54-209ENST00000555746 COBLL1Q53SF7 1204 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 FAM102AQ5T9C2 384 aaPredicted RBP4.2□□□□□ -1.74
SRP54-209ENST00000555746 KSR2Q6VAB6 950 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 Q6ZRM9 215 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 COL23A1Q86Y22 540 aaPredicted RBP4.2□□□□□ -1.74
SRP54-209ENST00000555746 ZFPM1Q8IX07 1006 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 FITM2Q8N6M3 262 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 RNF169Q8NCN4 708 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 IL31RAQ8NI17 732 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 LOXL4Q96JB6 756 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 GPR87Q9BY21 358 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 GSTO2Q9H4Y5 243 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 GPR35Q9HC97 309 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 CFAP97Q9P2B7 532 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 MED16Q9Y2X0 877 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 TCAF1Q9Y4C2 921 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 TESMINQ9Y4I5 508 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 HECW1Q76N89 1606 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 BLMP54132 1417 aaPredicted RBP4.2□□□□□ -1.74
SRP54-209ENST00000555746 CNTLNQ9NXG0 1405 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 AFF2P51816 1311 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 A0A1W2PPL8 197 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 CFAP69A5D8W1 941 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 ISM1B1AKI9 464 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 K7ESM1 405 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 MYO1FO00160 1098 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 APAF1O14727 1248 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 AHSGP02765 367 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 GNAI3P08754 354 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 RARBP10826 455 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 MYF5P13349 255 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 SLC5A1P13866 664 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 NPR1P16066 1061 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 RPL17P18621 184 aaKnown RBP4.19□□□□□ -1.74
SRP54-209ENST00000555746 SLC6A2P23975 617 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 ACRV1P26436 265 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 PEX2P28328 305 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 SCNN1GP51170 649 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 CHN2P52757 468 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 CTSWP56202 376 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 SOX8P57073 446 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 GNAI1P63096 354 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 TCF15Q12870 199 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 UBE4AQ14139 1066 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 KHDC1LQ5JSQ8 128 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 UTP14CQ5TAP6 766 aaKnown RBP4.19□□□□□ -1.74
SRP54-209ENST00000555746 AGAP9Q5VTM2 703 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 DEFB132Q7Z7B7 95 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 RHOT2Q8IXI1 618 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 AOPEPQ8N6M6 819 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 NUP133Q8WUM0 1156 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 KBTBD7Q8WVZ9 684 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 SCAMP4Q969E2 229 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 APIPQ96GX9 242 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 SLC39A13Q96H72 371 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 DCLRE1CQ96SD1 692 aaKnown RBP4.19□□□□□ -1.74
SRP54-209ENST00000555746 ADOQ96SZ5 270 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 C1QTNF3Q9BXJ4 246 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 DPH1Q9BZG8 443 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 LRRC27Q9C0I9 530 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 BTBD1Q9H0C5 482 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 BRD9Q9H8M2 597 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 RSAD1Q9HA92 442 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 CNNM1Q9NRU3 951 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 PIH1D1Q9NWS0 290 aaKnown RBP4.19□□□□□ -1.74
SRP54-209ENST00000555746 AURKAIP1Q9NWT8 199 aaPredicted RBP4.19□□□□□ -1.74
SRP54-209ENST00000555746 POGKQ9P215 609 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 STAP2Q9UGK3 403 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 PCDHA6Q9UN73 950 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 AGLP35573 1532 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 DISP1Q96F81 1524 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 MROH2AA6NES4 1674 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 KDM5CP41229 1560 aa4.19□□□□□ -1.74
SRP54-209ENST00000555746 MYO3AQ8NEV4 1616 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.18□□□□□ -1.74
SRP54-209ENST00000555746 NINLQ9Y2I6 1382 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 CDHR4A6H8M9 788 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 LEFTY2O00292 366 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 TRIM24O15164 1050 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 MGEA5O60502 916 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 FOXD2O60548 495 aaPredicted RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 AGFG2O95081 481 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 PRSS23O95084 383 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 MAP4K4O95819 1239 aaPredicted RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 CHEK2O96017 543 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 GJB1P08034 283 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 CKBP12277 381 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 HDCP19113 662 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 EN2P19622 333 aaPredicted RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 EXOSC9Q06265 439 aaKnown RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 SLFN5Q08AF3 891 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 EFEMP1Q12805 493 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms