RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 SV2CQ496J9 727 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 CCDC122Q5T0U0 273 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 TAF3Q5VWG9 929 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 GLB1LQ6UWU2 654 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 FAM43BQ6ZT52 329 aaPredicted RBP10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 SLC47A2Q86VL8 602 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 REXO1L1PQ8IX06 675 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 UBR7Q8N806 425 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 URGCPQ8TCY9 931 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 SLC20A1Q8WUM9 679 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 RNF25Q96BH1 459 aaPredicted RBP10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 FAXDC2Q96IV6 333 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 BCO2Q9BYV7 579 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 PDCL3Q9H2J4 239 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 SMYD3Q9H7B4 428 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 CYP3A43Q9HB55 503 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 LUC7LQ9NQ29 371 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 KCND1Q9NSA2 647 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 ADAMTS1Q9UHI8 967 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 PUF60Q9UHX1 559 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 PCDHB7Q9Y5E2 793 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 PCDHA13Q9Y5I0 950 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 SNX9Q9Y5X1 595 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 CASTOR2A6NHX0 329 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 PODXLO00592 558 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 ZNF263O14978 683 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 THAP12O43422 761 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 LCA5LO95447 670 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 TIMP1P01033 207 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 CALCAP01258 141 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 CYP11B1P15538 503 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 RAG1P15918 1043 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 GNA15P30679 374 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 GRIK3Q13003 919 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 TCTN1Q2MV58 587 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 ARHGAP29Q52LW3 1261 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 ZNF394Q53GI3 561 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 CNKSR3Q6P9H4 555 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 NOP9Q86U38 636 aaKnown RBP10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 GLYCTKQ8IVS8 523 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 ABI1Q8IZP0 508 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 TXLNBQ8N3L3 684 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 GSTCDQ8NEC7 633 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 LNX1Q8TBB1 728 aaPredicted RBP10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 EPS8L1Q8TE68 723 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 SDCBP2Q9H190 292 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 ELAC1Q9H777 363 aaKnown RBP10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 ACP6Q9NPH0 428 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 LZTFL1Q9NQ48 299 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 TMEM161AQ9NX61 479 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 CNTN6Q9UQ52 1028 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 REXO2Q9Y3B8 237 aaKnown RBP10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 SCN1AP35498 2009 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 DNAH12Q6ZR08 3092 aa10.32□□□□□ -0.76
HNRNPC-220ENST00000555585 A0A0U1RQJ8 604 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 TRIM43BA6NCK2 446 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 TMCO5BA8MYB1 307 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 KPNA7A9QM74 516 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 DDX3XO00571 662 aaKnown RBP eCLIP10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 KIAA0355O15063 1070 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 MMEP08473 750 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 FGFR1P11362 822 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 CHRNB2P17787 502 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 RPL9P32969 192 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 CLCNKBP51801 687 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 VAV2P52735 878 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 CDR2Q01850 454 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 RNASELQ05823 741 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 TUSC3Q13454 348 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 IKBKEQ14164 716 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 PTPN14Q15678 1187 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 NAB2Q15742 525 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 NOMO2Q5JPE7 1267 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 CLLU1OSQ5K130 101 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 DNTTIP2Q5QJE6 756 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 C10orf76Q5T2E6 689 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 ALKBH5Q6P6C2 394 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 ZNF677Q86XU0 584 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 TMEM199Q8N511 208 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 TTC39CQ8N584 583 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 ATRIPQ8WXE1 791 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 TRIM43Q96BQ3 446 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 C16orf45Q96MC5 204 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 UROC1Q96N76 676 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 FAM193BQ96PV7 902 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 SYT11Q9BT88 431 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 RRAGDQ9NQL2 400 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 CACNG4Q9UBN1 327 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 NAGPAQ9UK23 515 aa10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 NOCTQ9UK39 431 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-220ENST00000555585 TET1Q8NFU7 2136 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 MICAL3Q7RTP6 2002 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 FAM170AA1A519 330 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 SPTLC1O15269 473 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 INPPL1O15357 1258 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 HOXA2O43364 376 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 KRT86O43790 486 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 HUS1O60921 280 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms