RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 CCDC127Q96BQ5 260 aa14.8□□□□□ -0.04
SHMT2-219ENST00000555563 BORCS6Q96GS4 357 aa14.8□□□□□ -0.04
SHMT2-219ENST00000555563 ANKRD36BP1Q96IX9 119 aa14.8□□□□□ -0.04
SHMT2-219ENST00000555563 CGRRF1Q99675 332 aa14.8□□□□□ -0.04
SHMT2-219ENST00000555563 GZF1Q9H116 711 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-219ENST00000555563 WDR6Q9NNW5 1121 aaKnown RBP14.8□□□□□ -0.04
SHMT2-219ENST00000555563 C11orf16Q9NQ32 467 aa14.8□□□□□ -0.04
SHMT2-219ENST00000555563 DSEQ9UL01 958 aa14.8□□□□□ -0.04
SHMT2-219ENST00000555563 MAPK8IP1Q9UQF2 711 aa14.8□□□□□ -0.04
SHMT2-219ENST00000555563 C5orf42Q9H799 3197 aa14.8□□□□□ -0.04
SHMT2-219ENST00000555563 ARHGEF37A1IGU5 675 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 FAM86C2PA6NEL3 165 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 OR6C75A6NL08 312 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 KPNA7A9QM74 516 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 CYB561D2O14569 222 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 PRRG1O14668 218 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 GADD45BO75293 160 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-219ENST00000555563 SEC24AO95486 1093 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 TNNC2P02585 160 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 NR3C1P04150 777 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 CYP11A1P05108 521 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 KRT19P08727 400 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 ATF2P15336 505 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 RNF19BQ6ZMZ0 732 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 CSGALNACT2Q8N6G5 542 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 OR10T2Q8NGX3 314 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 PLEKHO2Q8TD55 490 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 ERCC4Q92889 916 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-219ENST00000555563 TMEM209Q96SK2 561 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 CYP4F11Q9HBI6 524 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 DMAC2Q9NW81 257 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 POLIQ9UNA4 740 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 USTQ9Y2C2 406 aa14.79□□□□□ -0.04
SHMT2-219ENST00000555563 PDXKO00764 312 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 N4BP1O75113 896 aaKnown RBP14.78□□□□□ -0.04
SHMT2-219ENST00000555563 XYLBO75191 536 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 KIF20AO95235 890 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 VNN2O95498 520 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 POU2F2P09086 479 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 ELF1P32519 619 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 NTHL1P78549 312 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 RBP5P82980 135 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 ADCY1Q08828 1119 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 DUOXA2Q1HG44 320 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 UVSSAQ2YD98 709 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 WSCD1Q658N2 575 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 TPGS2Q68CL5 300 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 OTOP3Q7RTS5 596 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 GRASPQ7Z6J2 395 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-219ENST00000555563 SLC9A9Q8IVB4 645 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 TCEAL8Q8IYN2 117 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 SMYD4Q8IYR2 804 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-219ENST00000555563 GUF1Q8N442 669 aaKnown RBP14.78□□□□□ -0.04
SHMT2-219ENST00000555563 TMEM174Q8WUU8 243 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 MFSD14AQ96MC6 490 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 TIGD1Q96MW7 591 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 PGLYRP2Q96PD5 576 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 FNBP1Q96RU3 617 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 RTP3Q9BQQ7 232 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 OXCT2Q9BYC2 517 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-219ENST00000555563 HCFC1R1Q9NWW0 138 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 AFF4Q9UHB7 1163 aaKnown RBP14.78□□□□□ -0.04
SHMT2-219ENST00000555563 TRAF3IP3Q9Y228 551 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 INSL5Q9Y5Q6 135 aa14.78□□□□□ -0.04
SHMT2-219ENST00000555563 KINO60870 393 aaKnown RBP14.77□□□□□ -0.05
SHMT2-219ENST00000555563 PRPF40AO75400 957 aaKnown RBP14.77□□□□□ -0.05
SHMT2-219ENST00000555563 ALADP13716 330 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 TNNI1P19237 187 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 CASP4P49662 377 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 MYBPC2Q14324 1141 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 RTL10Q7L3V2 364 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 GET4Q7L5D6 327 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-219ENST00000555563 TRAPPC11Q7Z392 1133 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 METTL23Q86XA0 190 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 ZDHHC14Q8IZN3 488 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 PDCL2Q8N4E4 241 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 ACSF2Q96CM8 615 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-219ENST00000555563 RMND1Q9NWS8 449 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 L1RE1Q9UN81 338 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 PCDHA5Q9Y5H7 936 aa14.77□□□□□ -0.05
SHMT2-219ENST00000555563 MTMR11A4FU01 709 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 CALUO43852 315 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-219ENST00000555563 SMC2O95347 1197 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 LRG1P02750 347 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 ASGR2P07307 311 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 NR2F2P24468 414 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 GBP2P32456 591 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-219ENST00000555563 MYO1EQ12965 1108 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 GPR17Q13304 367 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 PTPN21Q16825 1174 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 ZCWPW2Q504Y3 356 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 CEP135Q66GS9 1140 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 TTC9BQ8N6N2 239 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 SPATA20Q8TB22 786 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 ZNF516Q92618 1163 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 SMARCE1Q969G3 411 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 HPDLQ96IR7 371 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 GSDMAQ96QA5 445 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 MYADMQ96S97 322 aa14.76□□□□□ -0.05
SHMT2-219ENST00000555563 CRISPLD1Q9H336 500 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms