RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SSU72P8A0A1W2PR75 194 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 ESPNB1AK53 854 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 INPPL1O15357 1258 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 FAM228BP0C875 321 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 MSNP26038 577 aaKnown RBP10.92□□□□□ -0.66
SRP54-208ENST00000555557 SSTR3P32745 418 aaPredicted RBP10.92□□□□□ -0.66
SRP54-208ENST00000555557 TUSC3Q13454 348 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 UPP1Q16831 310 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 FAM117BQ6P1L5 589 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 C16orf59Q7L2K0 433 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 OTOP2Q7RTS6 562 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 CCDC170Q8IYT3 715 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 ABI1Q8IZP0 508 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 RBBP8NLQ8NC74 664 aaPredicted RBP10.92□□□□□ -0.66
SRP54-208ENST00000555557 OLIG1Q8TAK6 271 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 EPS8L1Q8TE68 723 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 TWNKQ96RR1 684 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 MRPL45Q9BRJ2 306 aaKnown RBP10.92□□□□□ -0.66
SRP54-208ENST00000555557 DNAJB4Q9UDY4 337 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 HMGXB4Q9UGU5 601 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 REXO2Q9Y3B8 237 aaKnown RBP10.92□□□□□ -0.66
SRP54-208ENST00000555557 ADGRG1Q9Y653 693 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 DDX3XO00571 662 aaKnown RBP eCLIP10.91□□□□□ -0.662e-11■■■□□ 16.3
SRP54-208ENST00000555557 HCRTO43612 131 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 B3GAT3O94766 335 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 CCDC172P0C7W6 258 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 P4HA1P13674 534 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 CYP11B1P15538 503 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 CYLC1P35663 651 aaPredicted RBP10.91□□□□□ -0.66
SRP54-208ENST00000555557 DEFB103AP81534 67 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 RNASELQ05823 741 aaKnown RBP10.91□□□□□ -0.66
SRP54-208ENST00000555557 SOWAHAQ2M3V2 549 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 PALB2Q86YC2 1186 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 GLYCTKQ8IVS8 523 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 RPUSD2Q8IZ73 545 aaKnown RBP10.91□□□□□ -0.66
SRP54-208ENST00000555557 LNX1Q8TBB1 728 aaPredicted RBP10.91□□□□□ -0.66
SRP54-208ENST00000555557 URGCPQ8TCY9 931 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 WHAMMQ8TF30 809 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 JAKMIP2Q96AA8 810 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 ZNF560Q96MR9 790 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 AGPAT1Q99943 283 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 SEPT11Q9NVA2 429 aaKnown RBP10.91□□□□□ -0.66
SRP54-208ENST00000555557 NOCTQ9UK39 431 aaKnown RBP10.91□□□□□ -0.66
SRP54-208ENST00000555557 CNTN6Q9UQ52 1028 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 PPP2R2CQ9Y2T4 447 aa10.91□□□□□ -0.66
SRP54-208ENST00000555557 BZW2Q9Y6E2 419 aaKnown RBP10.91□□□□□ -0.66
SRP54-208ENST00000555557 ABHD14A-ACY1A0A1B0GW23 586 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 TBKBP1A7MCY6 615 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 I3L4J1 428 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 ITGB1P05556 798 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 MMEP08473 750 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 CFHP08603 1231 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 CHRNB2P17787 502 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 RPL9P32969 192 aaKnown RBP10.9□□□□□ -0.66
SRP54-208ENST00000555557 PNPLA4P41247 253 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 BRCC3P46736 316 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 PDE6CP51160 858 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 SV2CQ496J9 727 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 CD300LGQ6UXG3 332 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 NPAS4Q8IUM7 802 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 CCAR2Q8N163 923 aaKnown RBP10.9□□□□□ -0.66
SRP54-208ENST00000555557 DDX1Q92499 740 aaKnown RBP10.9□□□□□ -0.66
SRP54-208ENST00000555557 SYT11Q9BT88 431 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 CYP3A43Q9HB55 503 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 PUF60Q9UHX1 559 aaKnown RBP10.9□□□□□ -0.66
SRP54-208ENST00000555557 ZMYND8Q9ULU4 1186 aaPredicted RBP10.9□□□□□ -0.66
SRP54-208ENST00000555557 L1RE1Q9UN81 338 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 NME7Q9Y5B8 376 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 TIMM13Q9Y5L4 95 aaPredicted RBP10.9□□□□□ -0.66
SRP54-208ENST00000555557 TTC3P53804 2025 aa10.9□□□□□ -0.66
SRP54-208ENST00000555557 TMCO5BA8MYB1 307 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 EIF3CLB5ME19 914 aaKnown RBP10.9□□□□□ -0.67
SRP54-208ENST00000555557 CYB561D2O14569 222 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 CILPO75339 1184 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 ABL1P00519 1130 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 TNFAIP3P21580 790 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 GNA15P30679 374 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 OR1G1P47890 313 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 ZNF132P52740 706 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 NDST1P52848 882 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 EPHB4P54760 987 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 FMO1Q01740 532 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 DSC1Q08554 894 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 SLC18A3Q16572 532 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 TIGD5Q53EQ6 642 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 ZNF365Q70YC5 407 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 FMNL3Q8IVF7 1028 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 COLGALT2Q8IYK4 626 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 OR6B3Q8NGW1 331 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 SENP8Q96LD8 212 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 FAM193BQ96PV7 902 aaPredicted RBP10.9□□□□□ -0.67
SRP54-208ENST00000555557 PCDHB18PQ96TA0 734 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 EIF3CQ99613 913 aaKnown RBP10.9□□□□□ -0.67
SRP54-208ENST00000555557 ZSWIM1Q9BR11 485 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 ELOVL4Q9GZR5 314 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 NRDE2Q9H7Z3 1164 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 IL23AQ9NPF7 189 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 GDAP2Q9NXN4 497 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 KANSL3Q9P2N6 904 aa10.9□□□□□ -0.67
SRP54-208ENST00000555557 PRG3Q9Y2Y8 225 aaPredicted RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms