RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SLC8B1Q6J4K2 584 aa13.04□□□□□ -0.32
SRP54-206ENST00000555317 RTL10Q7L3V2 364 aa13.04□□□□□ -0.32
SRP54-206ENST00000555317 SLC9A9Q8IVB4 645 aa13.04□□□□□ -0.32
SRP54-206ENST00000555317 THEM5Q8N1Q8 247 aa13.04□□□□□ -0.32
SRP54-206ENST00000555317 LRRC52Q8N7C0 313 aa13.04□□□□□ -0.32
SRP54-206ENST00000555317 TDRD5Q8NAT2 981 aaKnown RBP13.04□□□□□ -0.32
SRP54-206ENST00000555317 ZNF461Q8TAF7 563 aa13.04□□□□□ -0.32
SRP54-206ENST00000555317 TSG101Q99816 390 aa13.04□□□□□ -0.32
SRP54-206ENST00000555317 PRKD2Q9BZL6 878 aa13.04□□□□□ -0.32
SRP54-206ENST00000555317 POMKQ9H5K3 350 aa13.04□□□□□ -0.32
SRP54-206ENST00000555317 POLIQ9UNA4 740 aa13.04□□□□□ -0.32
SRP54-206ENST00000555317 SPTLC1O15269 473 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 PHACTR2O75167 634 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 LRG1P02750 347 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 NR2F2P24468 414 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 BIRC3Q13489 604 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 TRPC3Q13507 836 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 MRPL58Q14197 206 aaKnown RBP13.03□□□□□ -0.32
SRP54-206ENST00000555317 MYBPC2Q14324 1141 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 UVSSAQ2YD98 709 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 ZNF658Q5TYW1 1059 aaPredicted RBP13.03□□□□□ -0.32
SRP54-206ENST00000555317 RSPO2Q6UXX9 243 aaPredicted RBP13.03□□□□□ -0.32
SRP54-206ENST00000555317 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 ELOA2Q8IYF1 753 aaPredicted RBP13.03□□□□□ -0.32
SRP54-206ENST00000555317 SMYD4Q8IYR2 804 aaPredicted RBP13.03□□□□□ -0.32
SRP54-206ENST00000555317 ELMOD1Q8N336 334 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 OR5B17Q8NGF7 314 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 ACSF2Q96CM8 615 aaPredicted RBP13.03□□□□□ -0.32
SRP54-206ENST00000555317 IPO9Q96P70 1041 aaKnown RBP13.03□□□□□ -0.32
SRP54-206ENST00000555317 CYP4F11Q9HBI6 524 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 CDH22Q9UJ99 828 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 MAFFQ9ULX9 164 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 PCDHA5Q9Y5H7 936 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 TSC2P49815 1807 aa13.03□□□□□ -0.32
SRP54-206ENST00000555317 WDR27A2RRH5 827 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 LOC730098B7Z3J9 87 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 CCL16O15467 120 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 CYP11A1P05108 521 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 KRT13P13646 458 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 ATF2P15336 505 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 HOXA9P31269 272 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 AP3M2P53677 418 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 ADCY1Q08828 1119 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 TRAPPC11Q7Z392 1133 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.33
SRP54-206ENST00000555317 HPDLQ96IR7 371 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 FAM84AQ96KN4 292 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 MFSD14AQ96MC6 490 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 GBP4Q96PP9 640 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 RHOBTB2Q9BYZ6 727 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 AFF4Q9UHB7 1163 aaKnown RBP13.02□□□□□ -0.33
SRP54-206ENST00000555317 TRAF3IP3Q9Y228 551 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 SNX9Q9Y5X1 595 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 CLUHO75153 1309 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 TRIOO75962 3097 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 DENND4AQ7Z401 1863 aa13.02□□□□□ -0.33
SRP54-206ENST00000555317 GOLGA6L22H0YM25 854 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 PSMA7O14818 248 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 TBC1D4O60343 1298 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 ABLIM3O94929 683 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 ALADP13716 330 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 GBP2P32456 591 aaPredicted RBP13.01□□□□□ -0.33
SRP54-206ENST00000555317 PPP1R2P41236 205 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 TNNC1P63316 161 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 MYL7Q01449 175 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 TSPY1Q01534 308 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 PLD1Q13393 1074 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 ADAM9Q13443 819 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 NFIL3Q16649 462 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 EDRF1Q3B7T1 1238 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 WSCD1Q658N2 575 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 INTS8Q75QN2 995 aaKnown RBP13.01□□□□□ -0.33
SRP54-206ENST00000555317 TCEAL8Q8IYN2 117 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 TMEM86AQ8N2M4 240 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 TMEM174Q8WUU8 243 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 WDR6Q9NNW5 1121 aaKnown RBP13.01□□□□□ -0.33
SRP54-206ENST00000555317 DMAC2Q9NW81 257 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 SIX4Q9UIU6 781 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 USTQ9Y2C2 406 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 PTPRJQ12913 1337 aa13.01□□□□□ -0.33
SRP54-206ENST00000555317 CETN3O15182 167 aa13□□□□□ -0.33
SRP54-206ENST00000555317 MAPK13O15264 365 aa13□□□□□ -0.33
SRP54-206ENST00000555317 OR4Q2P0C623 313 aa13□□□□□ -0.33
SRP54-206ENST00000555317 EPB41P11171 864 aaKnown RBP13□□□□□ -0.33
SRP54-206ENST00000555317 PSMC2P35998 433 aaKnown RBP13□□□□□ -0.33
SRP54-206ENST00000555317 PRCPP42785 496 aa13□□□□□ -0.33
SRP54-206ENST00000555317 GPR17Q13304 367 aa13□□□□□ -0.33
SRP54-206ENST00000555317 SLC39A12Q504Y0 691 aa13□□□□□ -0.33
SRP54-206ENST00000555317 IQCEQ6IPM2 695 aa13□□□□□ -0.33
SRP54-206ENST00000555317 RNF19BQ6ZMZ0 732 aa13□□□□□ -0.33
SRP54-206ENST00000555317 GET4Q7L5D6 327 aaPredicted RBP13□□□□□ -0.33
SRP54-206ENST00000555317 GRASPQ7Z6J2 395 aaPredicted RBP13□□□□□ -0.33
SRP54-206ENST00000555317 RNF135Q8IUD6 432 aa13□□□□□ -0.33
SRP54-206ENST00000555317 FAM186BQ8IYM0 893 aa13□□□□□ -0.33
SRP54-206ENST00000555317 DCP1BQ8IZD4 617 aaKnown RBP13□□□□□ -0.33
SRP54-206ENST00000555317 ADGRF2Q8IZF7 708 aa13□□□□□ -0.33
SRP54-206ENST00000555317 PDCL2Q8N4E4 241 aa13□□□□□ -0.33
SRP54-206ENST00000555317 TOP6BLQ8N6T0 577 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms