RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 A1CFQ9NQ94 594 aaKnown RBP6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 TMX2Q9Y320 296 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 A0A087WWL8 130 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 DIRC3C9JPN6 131 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 M0QYG6 137 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 ZNF623O75123 536 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 PIM1P11309 404 aaPredicted RBP6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 ACO1P21399 889 aaKnown RBP6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 MAN2A2P49641 1150 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 RPS16P62249 146 aaKnown RBP6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 TCF15Q12870 199 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 CTBP1Q13363 440 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 CRB2Q5IJ48 1285 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 FAM160B1Q5W0V3 765 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 SPTY2D1Q68D10 685 aaPredicted RBP6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 MAMDC4Q6UXC1 1216 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 MICU3Q86XE3 530 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 LIX1LQ8IVB5 337 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 RHOT2Q8IXI1 618 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 PDPRQ8NCN5 879 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 MAML1Q92585 1016 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 DCLRE1CQ96SD1 692 aaKnown RBP6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 PNKPQ96T60 521 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 MNTQ99583 582 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 LRCH1Q9Y2L9 728 aa6.58□□□□□ -1.36
CKS1BP1-201ENST00000555221 MBD3L4A6NDZ8 208 aaPredicted RBP6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 MBD3L3A6NE82 208 aaPredicted RBP6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 F8W8V4 182 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 APOL1O14791 398 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 FGF18O76093 207 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 XRCC6P12956 609 aaKnown RBP eCLIP6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 KLRC1P26715 233 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 SLC11A2P49281 568 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 NHLH2Q02577 135 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 SLFN5Q08AF3 891 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 ZNF844Q08AG5 666 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 CHAF1AQ13111 956 aaPredicted RBP6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 STK3Q13188 491 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 KRT72Q14CN4 511 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 GRAMD1BQ3KR37 738 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 NOMO2Q5JPE7 1267 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 AGAP9Q5VTM2 703 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 C1QL3Q5VWW1 255 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 MYLK4Q86YV6 388 aaPredicted RBP6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 SYT12Q8IV01 421 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 SDR16C5Q8N3Y7 309 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 ZNF808Q8N4W9 903 aaPredicted RBP6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 DNAJC5GQ8N7S2 189 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 RNF152Q8N8N0 203 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 ATP11CQ8NB49 1132 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 VPS37AQ8NEZ2 397 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 DNERQ8NFT8 737 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 Q8TCH9 128 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 IPCEF1Q8WWN9 437 aaPredicted RBP6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 IQCDQ96DY2 449 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 MOGAT1Q96PD6 335 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 VPS11Q9H270 941 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 RNPEPQ9H4A4 650 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 TRMT13Q9NUP7 481 aaKnown RBP6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 RGS17Q9UGC6 210 aaPredicted RBP6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 AGAP1Q9UPQ3 857 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 ATP11BQ9Y2G3 1177 aa6.57□□□□□ -1.36
CKS1BP1-201ENST00000555221 KLRG2A4D1S0 409 aaPredicted RBP6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 E9PLN8 166 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 PYCARD-AS1I3L0S3 204 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 NCK2O43639 380 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 KIF20AO95235 890 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 ITGB3P05106 788 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 ANXA2P07355 339 aaKnown RBP6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 CYP2C9P11712 490 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 UCP3P55916 312 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 CNGB1Q14028 1251 aaPredicted RBP6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 FAM102AQ5T9C2 384 aaPredicted RBP6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 HIBCHQ6NVY1 386 aaPredicted RBP6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 Q6ZSN1 163 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 PPP1R32Q7Z5V6 425 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 MPP5Q8N3R9 675 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 SLC15A4Q8N697 577 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 EDAQ92838 391 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 SNX22Q96L94 193 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 RBM15Q96T37 977 aaKnown RBP eCLIP6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 SMOQ99835 787 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 VKORC1Q9BQB6 163 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 SPATA5L1Q9BVQ7 753 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 GPRC5BQ9NZH0 403 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 EIF2B4Q9UI10 523 aaKnown RBP6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 CDYLQ9Y232 598 aa6.56□□□□□ -1.36
CKS1BP1-201ENST00000555221 A0A1W2PPC4 97 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 F5H423 210 aaPredicted RBP6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 LEFTY2O00292 366 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 POLRMTO00411 1230 aaKnown RBP6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 THAP12O43422 761 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 RECQL4O94761 1208 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 PRSS23O95084 383 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 SPATA31D3P0C874 917 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 FCER1AP12319 257 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 HIBADHP31937 336 aaKnown RBP6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 VIPR2P41587 438 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 WNT3P56703 355 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 HTRA4P83105 476 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms